Mesorhizobium onobrychidis: IHQ72_10555
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Entry
IHQ72_10555 CDS
T08462
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
moh
Mesorhizobium onobrychidis
Brite
KEGG Orthology (KO) [BR:
moh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
moh03032
]
IHQ72_10555
03400 DNA repair and recombination proteins [BR:
moh03400
]
IHQ72_10555
Enzymes [BR:
moh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IHQ72_10555
DNA replication proteins [BR:
moh03032
]
Prokaryotic type
DNA Topoisomerases
IHQ72_10555
DNA repair and recombination proteins [BR:
moh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IHQ72_10555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UVC17509
LinkDB
All DBs
Position
2153488..2154594
Genome browser
AA seq
368 aa
AA seq
DB search
MLDKSGSSSGQSAAREVAPKNGAPKNGSQASADRASLTYITDAEPGIRRFRTGRGFSYKG
PGGQGVDDDTMTRIEALAIPPAWTDVWISPDADGHIQATGRDQRGRKQYRYHALWAEERD
GVKYSSLAAFAESLPELRRQIDADLRRHGLPLERVVAAVVWLLDNTMIRVGNAAYARDNN
SFGLTTLRDRHVDVNGSSLRFAFKGKSGKEWKLKLVDRRIARIVRGVQDLPGQKLFQYLD
EDGSRRPIRSDEVNRYIRENAGDDFSSKHFRTWGGTIHAASLFAQIERPESQAQQKRVMN
GVIDKVAERLGNTRAICRRCYIHPQVFEAWSEGRLLSEMADVNKRKRSIPGLDDEEALVL
RWLKAQES
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgctggacaaatccgggtcgtcgtctggccaatcggctgccagggaggttgcaccaaag
aacggggcgccgaaaaatgggtcgcaagcctctgccgatcgagcctcactcacctacatc
actgacgctgagcccggtatccgccgttttaggactggcaggggattttcatacaaagga
cctggcgggcagggtgtcgacgacgacactatgacccgcatcgaggcgctcgccataccg
ccggcgtggacggatgtgtggatatcgccggatgctgacggtcacattcaggcgactggc
cgggatcagcgtgggcgtaagcaatatcggtatcatgcgctgtgggcggaggagcgtgac
ggcgtcaaatattcgagcctggctgcctttgcagaaagcctgcctgagttgcggcgccag
atcgatgccgacctgcgccgtcacggcctgccgctggaacgcgttgtcgccgctgtggtc
tggctgctcgacaacacaatgatccgcgtcggcaacgccgcctacgctcgcgacaacaac
agctttgggctgaccacgctgcgcgaccgccatgtcgacgtcaatggctcgagcctgcgt
ttcgctttcaaaggcaagtccggcaaggaatggaagctgaagctcgtcgatcgccggatt
gccaggatcgtgcgcggggtgcaggatttgccgggccagaagctgttccagtatctcgac
gaggatggaagcaggcgaccgatccgctccgacgaagtcaaccgctacatcagggagaac
gcaggggacgatttcagctccaagcatttccgaacctggggcggcaccatccatgctgcg
tcactgtttgcgcaaatcgaacgacccgaaagccaggcacaacagaagcgggtgatgaac
ggcgtcatcgacaaggtggccgagcggctgggcaacacgcgcgccatctgccgcaggtgt
tacatccacccgcaagttttcgaagcctggtccgaaggacggctgctcagcgaaatggcg
gatgtgaataagcggaagcgatcgatacccggtcttgatgacgaagaagccctcgttctg
agatggttgaaggcgcaggaaagctga
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