Mesorhizobium onobrychidis: IHQ72_17595
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Entry
IHQ72_17595 CDS
T08462
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
moh
Mesorhizobium onobrychidis
Pathway
moh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IHQ72_17595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moh03019
]
IHQ72_17595
Messenger RNA biogenesis [BR:
moh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IHQ72_17595
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UVC18722
UniProt:
A0ABY5R7X1
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Position
3562548..3564218
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AA seq
556 aa
AA seq
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MATAENAELVFVPLGGVGEIGMNFALYGYGPANAREWIVVDVGVTFPDASLPGVDLVLPD
TRFIEENIANLRGIVITHAHEDHYGALLDTWPKLKAPVWMTPFGAGLLEAKRQGEQGAPK
IPVTIYRAGEKFSVGPFEIEAIPVAHSIPEPMSLAITSPAGTVIHTGDWKIDPAPTIGPM
TDEARFRAYGDKGVLALICDSTNALREGESPSEVAVGEGLKGVIQSAKGRVAVTTFSSNV
GRIVSIAKAARDAGRQCLVLGRSLKRVIDVAGELGYMDGLPEFIAEEDFGFIPRENLVII
CTGSQGEPLAALAKLSREEMKSVSLTAGDTVVFSSRTIPGNEKGILEIKNRLIDLGIKII
EDGDALVHVSGHPRRSELRKMYQWVRPQIGVPVHGEAAHLVAQGSLMSVSGIGQVAQVRD
GDMLRLYPGAATIIDQVPFGRIYKDGRLIGTDQAMGIRDRRKLSFAGHVAVNVVLDDKYE
LAGDPDLVAIGVAEADARGESLEDLMIDAAIGAVDSIPRQRRRDLDLVQEAVRRAVRGAA
NEAWGKKPLVTVFVTR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggaaaacgccgaacttgtcttcgtgccgctcggcggcgtcggcgagatc
ggcatgaacttcgccctctatggctacggcccggccaatgcgcgcgaatggatcgtcgtc
gatgtcggtgtcacctttcccgatgccagcctgcctggcgtcgacctggtgctgcccgac
acgcgcttcatcgaggagaatatcgccaacctgcgcggcatcgtcatcacgcacgcgcat
gaggaccattacggcgcgctgctcgacacatggccgaagctcaaggcgccggtctggatg
acgccgttcggcgccggattgctggaagccaagcggcagggcgagcagggtgcaccgaaa
atcccggtgacgatctaccgcgccggcgaaaaattcagcgtcggcccgttcgagatcgag
gccatcccggtcgcgcattcgatccccgaaccgatgtcgctggcgatcacctcgccggcc
ggcaccgtcatccacaccggcgactggaagatcgatccggcgccgacgatcgggccgatg
accgacgaggcccgcttccgcgcctatggcgacaagggcgtgctggcgctgatctgcgat
tccacaaatgcgctgcgggaaggggagtcgccgtcggaagtggcggtgggcgagggcctc
aagggcgtcatccagagcgccaagggccgtgtcgcggtcaccactttttcctccaatgtc
gggcgcatcgtctccatcgccaaggcggcacgcgatgccggccgccagtgcctggtgctc
ggccgctcgctgaagcgcgtcatcgatgttgccggcgagctcggctatatggatgggctg
cccgaattcatcgccgaggaggactttggcttcatcccgcgcgaaaacctcgtcatcatc
tgcaccggcagccagggcgagccgcttgcggccttggcaaaactgtcgcgcgaggagatg
aaatcggtgtcgctgacggcaggcgacacggtggtgttttcctcgcgcaccattcccggc
aacgagaagggcatcctcgagatcaagaaccgcctgatcgatctcggcatcaagatcatc
gaggacggcgatgcgctggtgcatgtctccggccatccgcgccgcagcgagttgcgcaag
atgtatcaatgggtgcgcccgcagatcggcgtaccggtgcatggcgaggcggcgcatctg
gtggcgcagggctcgctgatgtcggtgtcgggcatcggccaggtggcgcaggtgcgcgac
ggcgacatgctgcggctctaccccggtgcggcgacgatcatcgaccaggtgccgttcggc
cgcatctacaaggacggcaggctgatcggcactgaccaggcgatgggcattcgcgaccgg
cgcaagctgtcctttgccggccatgtcgcggtcaatgtcgtgctcgacgacaaatatgag
ctcgccggcgatcccgatctggtcgcgatcggcgtcgccgaggccgacgcccgcggcgag
agcctggaagacctgatgatcgatgcggcaatcggcgccgtggactccatcccgcgtcag
cgccgaagagatctcgacctcgtgcaggaggcagtgcgccgcgccgtccgcggcgccgcc
aatgaagcctggggcaagaagccgctggtgacggtgttcgtcacaaggtaa
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