KEGG   Mesorhizobium onobrychidis: IHQ72_17595
Entry
IHQ72_17595       CDS       T08462                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
moh  Mesorhizobium onobrychidis
Pathway
moh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:moh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IHQ72_17595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:moh03019]
    IHQ72_17595
Messenger RNA biogenesis [BR:moh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IHQ72_17595
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: UVC18722
UniProt: A0ABY5R7X1
LinkDB
Position
3562548..3564218
AA seq 556 aa
MATAENAELVFVPLGGVGEIGMNFALYGYGPANAREWIVVDVGVTFPDASLPGVDLVLPD
TRFIEENIANLRGIVITHAHEDHYGALLDTWPKLKAPVWMTPFGAGLLEAKRQGEQGAPK
IPVTIYRAGEKFSVGPFEIEAIPVAHSIPEPMSLAITSPAGTVIHTGDWKIDPAPTIGPM
TDEARFRAYGDKGVLALICDSTNALREGESPSEVAVGEGLKGVIQSAKGRVAVTTFSSNV
GRIVSIAKAARDAGRQCLVLGRSLKRVIDVAGELGYMDGLPEFIAEEDFGFIPRENLVII
CTGSQGEPLAALAKLSREEMKSVSLTAGDTVVFSSRTIPGNEKGILEIKNRLIDLGIKII
EDGDALVHVSGHPRRSELRKMYQWVRPQIGVPVHGEAAHLVAQGSLMSVSGIGQVAQVRD
GDMLRLYPGAATIIDQVPFGRIYKDGRLIGTDQAMGIRDRRKLSFAGHVAVNVVLDDKYE
LAGDPDLVAIGVAEADARGESLEDLMIDAAIGAVDSIPRQRRRDLDLVQEAVRRAVRGAA
NEAWGKKPLVTVFVTR
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggcgacagcggaaaacgccgaacttgtcttcgtgccgctcggcggcgtcggcgagatc
ggcatgaacttcgccctctatggctacggcccggccaatgcgcgcgaatggatcgtcgtc
gatgtcggtgtcacctttcccgatgccagcctgcctggcgtcgacctggtgctgcccgac
acgcgcttcatcgaggagaatatcgccaacctgcgcggcatcgtcatcacgcacgcgcat
gaggaccattacggcgcgctgctcgacacatggccgaagctcaaggcgccggtctggatg
acgccgttcggcgccggattgctggaagccaagcggcagggcgagcagggtgcaccgaaa
atcccggtgacgatctaccgcgccggcgaaaaattcagcgtcggcccgttcgagatcgag
gccatcccggtcgcgcattcgatccccgaaccgatgtcgctggcgatcacctcgccggcc
ggcaccgtcatccacaccggcgactggaagatcgatccggcgccgacgatcgggccgatg
accgacgaggcccgcttccgcgcctatggcgacaagggcgtgctggcgctgatctgcgat
tccacaaatgcgctgcgggaaggggagtcgccgtcggaagtggcggtgggcgagggcctc
aagggcgtcatccagagcgccaagggccgtgtcgcggtcaccactttttcctccaatgtc
gggcgcatcgtctccatcgccaaggcggcacgcgatgccggccgccagtgcctggtgctc
ggccgctcgctgaagcgcgtcatcgatgttgccggcgagctcggctatatggatgggctg
cccgaattcatcgccgaggaggactttggcttcatcccgcgcgaaaacctcgtcatcatc
tgcaccggcagccagggcgagccgcttgcggccttggcaaaactgtcgcgcgaggagatg
aaatcggtgtcgctgacggcaggcgacacggtggtgttttcctcgcgcaccattcccggc
aacgagaagggcatcctcgagatcaagaaccgcctgatcgatctcggcatcaagatcatc
gaggacggcgatgcgctggtgcatgtctccggccatccgcgccgcagcgagttgcgcaag
atgtatcaatgggtgcgcccgcagatcggcgtaccggtgcatggcgaggcggcgcatctg
gtggcgcagggctcgctgatgtcggtgtcgggcatcggccaggtggcgcaggtgcgcgac
ggcgacatgctgcggctctaccccggtgcggcgacgatcatcgaccaggtgccgttcggc
cgcatctacaaggacggcaggctgatcggcactgaccaggcgatgggcattcgcgaccgg
cgcaagctgtcctttgccggccatgtcgcggtcaatgtcgtgctcgacgacaaatatgag
ctcgccggcgatcccgatctggtcgcgatcggcgtcgccgaggccgacgcccgcggcgag
agcctggaagacctgatgatcgatgcggcaatcggcgccgtggactccatcccgcgtcag
cgccgaagagatctcgacctcgtgcaggaggcagtgcgccgcgccgtccgcggcgccgcc
aatgaagcctggggcaagaagccgctggtgacggtgttcgtcacaaggtaa

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