Mesorhizobium onobrychidis: IHQ72_19610
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Entry
IHQ72_19610 CDS
T08462
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
moh
Mesorhizobium onobrychidis
Pathway
moh03410
Base excision repair
moh03430
Mismatch repair
moh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
moh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IHQ72_19610 (recJ)
03430 Mismatch repair
IHQ72_19610 (recJ)
03440 Homologous recombination
IHQ72_19610 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
moh03400
]
IHQ72_19610 (recJ)
DNA repair and recombination proteins [BR:
moh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
IHQ72_19610 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IHQ72_19610 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IHQ72_19610 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF2214
Motif
Other DBs
NCBI-ProteinID:
UVC12966
UniProt:
A0ABY5QP88
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All DBs
Position
3971675..3973459
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AA seq
594 aa
AA seq
DB search
MTGENRIFLDVRQSASGVSWEHRLTERQDMTALAIAQGYGVPDIVARVLAGRGVTAEQTE
RFLYPTIRDLLPDPASLTDMDKAAARIAEAIVTGERVAIFGDYDVDGAASSALLKRFLTH
FSVPAEIYIPDRIFEGYGPNPEAMRELVSRGATLIVTVDCGTNSAVSIDAANAVGADVVV
LDHHQLGGPLPAAEAVVNPNREDDLSGQGHLCAAGVVFLALVQTAKVLRGRLPDAEPPDL
LGLLDLVALATVCDVVPLTGVNRAFVVKGLQMARQQRNEGLAALARVSRIGEPVSTFHLA
YLIGPRINAGGRIGDAALGSRLLATDDPVEARTIAETLDRLNQERQQMELEMLAAARVEA
DAELAGGNGPAIVVTASSNWHPGIVGLLASRLKDHARRPAFAIAFNANGVGTGSGRSVSG
FDLGRLVRAAAIAGLIVKGGGHGMAAGITVERAKLGALRAFFEERAAADVFRLQGEESLA
IDGALAAEGATLGLLDALEKAGPFGAGHVAPIFALPRHRLADARPVGTNHVRAELQSESG
GRIQAIAFRAVDTALGAFLFKNRGKPVHVAGSLSGNHWNGNRTVQFRIVDAALA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcgaaaaccgtatcttcctcgacgtcaggcagtcggcatcaggtgtttcctgg
gaacaccggctgaccgagcggcaggacatgaccgcgcttgccatagcgcaaggctatggc
gtgccggacatcgttgcgcgcgtgcttgccgggcgcggcgtgaccgccgagcagaccgag
cggttcctttatccgaccatccgcgatcttttgccggacccggcgtcgctgaccgacatg
gacaaggccgccgcccgcatcgctgaagcgatcgtgaccggggaaagagtggcgatcttc
ggggactacgacgtcgacggcgccgcctcgtcggcgctgctcaagcggtttctcacgcat
ttctccgtgccagcggagatctacataccggaccgtatcttcgaagggtacggccccaat
ccggaagccatgcgcgaactcgtctcacgcggcgcaacgctgatcgtcaccgtcgattgc
ggcaccaacagcgccgtttccatcgacgcggcgaacgctgtcggcgccgatgtcgtggtg
ctcgatcatcaccaactcggcggtccgttgccggcagcggaagcggtggtcaatcccaat
cgcgaggacgacctttcggggcagggccatctttgtgccgccggcgtcgtcttcctggct
ctggtgcagacggcgaaggtcctgcgcggccggttgccggatgccgaaccgcccgacctg
ctcggcctgctcgatcttgtggccctggcgaccgtctgcgacgtggtgccgctgaccggc
gtcaaccgcgccttcgtggtcaagggactgcagatggcgcgccagcagaggaacgaaggg
ctggcggcgttggcgcgggtctcgcgcatcggcgagccggtcagcaccttccacctggcc
tatctgatcggcccgcgcatcaatgccggcgggcgcatcggcgacgcagcgctcggcagc
cgcctgctcgccaccgacgatcccgtcgaggcccgcaccatcgccgagacgctggaccgg
ctcaatcaggagcggcagcagatggaactggaaatgctggccgcggcacgcgtggaggcc
gatgccgagcttgccggcggcaatgggccggccatcgtcgtcaccgccagctccaattgg
catccgggcatcgtcggcctgctggcctcgcggctcaaggaccatgcccgccggcccgct
ttcgccatcgccttcaacgccaacggtgtcggcacggggtcgggccgttcggtgtcgggc
ttcgacctcggccggctggtgcgcgcggcggccattgccgggctgatcgtcaaaggcggc
ggccatggcatggcggccggcatcacagtggagcgggcgaaacttggcgcgctcagggcc
ttcttcgaggaacgagcggcggccgacgtgttccggctgcaaggcgaggaaagcctggcg
atcgacggtgcgctggccgccgagggcgcgacgctcggcctgctcgatgcattggagaaa
gccggcccgttcggcgccgggcatgtcgcaccgatcttcgcgctgccgcgccatcgcctc
gccgatgcaaggccggtcggcaccaatcacgtccgcgccgagttgcagtcggaaagcggc
ggccgcatccaggcgatcgcgtttcgcgccgtcgatacggcactcggcgcattcctgttc
aagaacaggggcaagccggtgcacgtcgcgggttcgctgtcgggcaatcactggaacggc
aaccgcacggtgcagttccgcatcgtcgatgccgcgttggcttga
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