Mesorhizobium onobrychidis: IHQ72_34210
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Entry
IHQ72_34210 CDS
T08462
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
moh
Mesorhizobium onobrychidis
Pathway
moh02020
Two-component system
moh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
moh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IHQ72_34210 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IHQ72_34210 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
moh03021
]
IHQ72_34210 (rpoN)
Transcription machinery [BR:
moh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IHQ72_34210 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Fe_hyd_lg_C
Motif
Other DBs
NCBI-ProteinID:
UVC15441
UniProt:
A0ABY5QW53
LinkDB
All DBs
Position
7018375..7019784
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AA seq
469 aa
AA seq
DB search
MKSSFGLLQKQSLAASPQLIESIRLLQLTHAELHQFVDQELEKNPLLEHAPIDDGLSGEV
AGSTWNGSPDQPRQGKSQTNATNTAPGDRPAFEEFVALAETLHDHVARQISLTAFTPHER
LIASQLAGHLDDTGYLQASPSDLAGNLNIPPADVERVLGIVQHFDPPGIFARTLGECLEI
QLRQRNRFDPAMAALIANLEMLARRDFQTLKQRCGVDEEDLLDMLQEIRALDPKPGNAFQ
SGAPECVVPDVWVTPSPGGGWQIELDPNTLPKVLINQSYVAEVSCRAAKKSKDMTFLNEC
LQNANWLIRSLDQRAKTILKVVTEIVRQQDAFLEYGVAHLRPLNLRTVADAINMHESTVS
RVTSNKYMVTPRGVFELKYFFTVAIASCEGGDAHSAEAVRHRIKAMVAEESLDNVLSDDD
IADRLKECGIHLARRTVTKYREAMNIPSSIQRRREKRLWRNGDQGLKAS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatcgtttggcctacttcagaaacagtctcttgcagcatcgcctcaactcatc
gagtcgattcgcttgctgcaactgacgcatgccgaactgcatcagttcgtggatcaggag
ctcgagaagaatccgcttctggagcatgcgccaatcgacgacgggctgtctggggaggtt
gcaggatcgacctggaacgggtccccggaccagccccggcaagggaaatcccagacgaac
gcgaccaacaccgcgcctggtgatcgtcctgccttcgaggagtttgtcgccttagccgaa
actttgcacgaccatgtcgctcgtcagatctccctcactgccttcacaccgcacgagcgg
ctgattgctagtcagcttgccggtcatctggatgacactggctatcttcaggcaagtcct
tcggacctggccgggaacctgaacattcctccggccgatgtggaacgggttctaggtatc
gtgcagcacttcgatccgccgggaattttcgcacgaactcttggcgaatgtcttgagata
cagctgcgccagcgaaaccggttcgacccggcgatggcggctttgattgccaaccttgag
atgcttgcgcgacgcgattttcagacattgaagcagcgttgcggcgtcgatgaagaggat
cttcttgacatgctgcaggaaatccgtgcgctcgaccccaagcctggaaacgcattccaa
tcgggcgcgccggaatgcgtcgtaccggacgtctgggtcacgccctcgcccggaggtgga
tggcagatcgagctcgatccgaacacactgcccaaggtgctgatcaaccaaagctatgtc
gcggaggtttcatgccgagccgccaaaaaatcgaaagacatgacatttctcaacgaatgc
ttgcagaacgcgaactggttgatccgcagcctcgatcagcgggccaagaccatccttaag
gttgtgaccgagatcgtgcgccagcaggatgcctttctggaatatggcgtcgcccaccta
cggccactcaatctcaggacggtcgctgacgcgatcaacatgcacgagtcgactgtaagc
cgggtgacgtcgaacaagtacatggttaccccacgcggggtgttcgaacttaagtacttt
ttcactgtcgcgatcgcctcctgcgaaggcggtgacgcgcactccgccgaagccgtccgc
catcggatcaaagcgatggtcgccgaagaatcccttgataacgtgctttcggacgatgac
atcgctgaccggctcaaggaatgcggcatccatctcgctcgccgcaccgtcacgaaatat
cgcgaggcgatgaatatcccctcctccatacagcggcgccgggaaaagcgcttgtggcgc
aacggcgatcaaggccttaaggcctcgtga
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