Microbacterium oryzae: D7D94_01660
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Entry
D7D94_01660 CDS
T09900
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
moj
Microbacterium oryzae
Pathway
moj03420
Nucleotide excision repair
moj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
moj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D7D94_01660
03430 Mismatch repair
D7D94_01660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
moj03400
]
D7D94_01660
Enzymes [BR:
moj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D7D94_01660
DNA repair and recombination proteins [BR:
moj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D7D94_01660
MMR (mismatch excision repair)
Other MMR factors
D7D94_01660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QGU28729
UniProt:
A0A6I6E433
LinkDB
All DBs
Position
376445..379903
Genome browser
AA seq
1152 aa
AA seq
DB search
MMTPGAEDLASGWPGGHGIRATDIATALGQPMPTEAQQRVIEAPPTPALVVAGAGSGKTE
TMAARVVWLVANGHVRRDEVLGLTFTRKAAGELAERITARLSLIDEFGRRGLLPHLPAIV
SGGDLDRIAAASTPRQRDVVRRQVLDELAERHATGWDPVAPRTADDLMIRPRVATYNAFA
DSIVREHSARIGRDPDAAMLTQSASWLIARAVVLRAELTGLEDIDKALSTLVDAVQRLAG
DVLDHRVDLDELERVCAVEAAAVAPYVDETKDRDIEKAWRHLEAMPVLVQLVRAYMAEKA
RRGVLDFADQVGGAYDIVEGAPDVRAELREQYRVVLLDEYQDTSVIQTRFLAELFRDSAV
MAVGDPHQSIYGWRGASADNLYAFARAFAHDRSAASYSLMTSWRNDQRILRAANRVLAPL
QRAGGFAVPELAARPGAGEGRVGVRFAATVDDEADEVADWFARVRAEHEAQASARAHTGA
ILFRSKRHMQTFAAALGRRGIPHRILGLGGLLSTPEVTDVVSALRVIHDPTSGSALIRLL
VGPRFAVGVADMGALHDLATVLAQRDGALNPLPDEVRDRLRASRGADEAVSIVDAVEFLR
TARDDYRLLAGISPEGRARLRAAGEMLERLRRAAGQPIPELIRLIESELRLDIELAANET
RGPARVAATQLRAFGDEVRAFLSADERGTIGSLLAWLEKAERTDELVPRPEPPEPGVVQL
LTIHGSKGLEWDAVAVVRLVKDELPSRVTDASGWLGFGVLPFTLRGDRDALPRLEWDPAS
AMDAAGDDQGKRHRAAEKALASAITEFKKRNGEYQREEERRLAYVAITRARGDLLLTGSH
WAGQKTPRTPSEYLVEIIEELDLEPVGETDPEENPYEGTAMTKSWPMDPLGDRRGRISAA
LERVAAAPVATPSPQLARLLAERAERERGRRFAAPTRVPASRFKDYVADYTGTISQIARP
MPERPYQQTRIGTLFHQWVEARSGTTGSSAAIDDALWETDEEVWDEGRDTEVSAADEAAL
ERLRETFLQSEWARLRPLAVETEIDFPLPSIDGAPEHIVICKLDAVYLRDDRGGRIEIVD
WKTGRAPRTPAEREARMLQLALYRLAYHRRHGVPLEDIDVTLYYVADDLVLRDERVLTAE
EVARRWQAAQRG
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgatgacccccggcgcggaggacctcgcgtccggctggccgggcgggcacggcatccgc
gccacggacatcgccaccgcactcggtcagccgatgccgaccgaggcgcagcagcgcgtc
atcgaggcgccgccgacgccggcgctcgtggtcgcgggggcgggcagcggcaagaccgag
accatggccgcccgcgtggtctggctcgtggccaacgggcatgtgcgcagggacgaggtc
ctgggcctgaccttcacgcgcaaggcggcgggggagctcgccgagcggatcactgcccgg
ctgtcgctcatcgacgagttcggccgtcgggggctcctcccgcacctgccggcgatcgtc
tccgggggcgatctcgaccgcatcgccgcggcgtcgacgccgcgtcagcgcgacgtcgtg
cgacggcaggtcctcgacgagctggccgagcggcacgccaccggatgggacccggtggcg
ccgcgcaccgccgacgacctcatgatccggccgcgggtggcgacctacaacgccttcgcc
gactccatcgtccgcgagcactccgcccggatcggccgcgaccccgatgcggcgatgctc
acgcagtcggcttcgtggctgatcgcccgcgcggtcgtgctgcgggcagagctgaccggg
ctcgaggacatcgacaaggcgctcagcactctcgtcgacgcggtgcagcgcctggcgggc
gacgtgctggaccaccgcgtggacctcgacgagctcgagcgcgtgtgcgccgtcgaggcg
gcggcggtcgcgccgtacgtcgacgagacgaaggaccgcgacatcgagaaggcctggcgc
cacctcgaggcgatgcccgtgctcgtccagctcgtgcgcgcctacatggcggagaaggcg
cgccgcggcgtgctggacttcgccgaccaggtcggcggcgcgtacgacatcgtcgagggc
gcgccggatgtgcgggccgagctccgagagcagtaccgcgtggtgctcctcgacgagtac
caggacacctcggtcatccagacgcgcttcctcgccgagctcttccgagactccgccgtc
atggcggtgggcgatccgcaccagtcgatctacggatggcgcggggccagcgccgacaac
ctgtacgccttcgcccgtgccttcgcccatgaccgctccgccgcgtcctacagcctcatg
acgagctggcggaacgaccagcgcatcctccgcgccgcgaaccgcgtgctcgccccgctg
cagcgcgcggggggattcgcggttccggagctcgccgcgagaccgggagcgggcgagggg
cgcgtgggcgtgcggttcgccgcgaccgtcgacgacgaggccgacgaggtcgccgactgg
ttcgcgcgggtccgcgccgagcacgaggcgcaggcgagtgcgcgcgcgcacaccggcgcc
atcctcttccgctccaagcggcacatgcagacgttcgccgccgcgctcggacgccgcggc
atcccccaccgcatcctcggcctgggcggcctgctgtccacgcccgaggtgaccgacgtc
gtctccgcgctgcgggtcatccacgatccgacctccgggtccgccctcatccgcctcctc
gtcggcccgaggttcgcggtcggcgtggccgacatgggcgcgctgcacgatctcgcgacc
gtgctcgctcagcgcgacggcgccctgaacccgctgcccgacgaggtgcgcgatcggctc
cgcgcctcccgcggcgcggacgaggcggtctcgatcgtcgatgcggtcgagttcctccgc
acggcgcgggacgactaccggctgctcgccggcatcagcccggaaggccgggcgcggctg
cgcgcggcgggggagatgctcgagcggttgcggcgcgcggccggtcagccgatccccgag
ctcatccgcctcatcgagagcgagctgcgactcgacatcgagctcgctgccaacgagacc
cgggggccggcccgcgtggccgcgacgcagctgcgcgccttcggcgacgaggtgcgcgcc
ttcctgtccgccgacgagcgcggcacgatcggcagcctgctggcgtggctcgagaaggcc
gagcgcaccgacgagctcgttccgcgccccgagccgccggaacccggcgtcgtgcagctg
ctgacgatccacggctcgaagggactggaatgggacgcggtcgccgtcgtccgactggtg
aaggacgagctgccgagccgtgtcaccgacgcttccggatggctgggcttcggcgtgctg
ccgttcaccctgcgcggcgaccgggatgcgctgccccggctggagtgggacccggcgtcg
gccatggacgccgcgggcgacgaccagggcaagcggcatcgcgcggcggagaaggcgctg
gcgtcggcgatcaccgagttcaagaagcgcaacggcgagtaccagcgcgaggaggagcgg
cggctggcctacgtggcgatcacacgcgcgcgcggcgacctgctgctcaccggctcgcac
tgggccggccagaagacgccgcggacgccgagcgagtacctcgtcgagatcatcgaggag
ctcgacctcgagcccgtgggcgagaccgatcccgaggagaacccctacgaggggaccgcg
atgacgaagtcctggccgatggacccgctgggtgatcggcgcgggcggatctccgcggcg
ctcgagcgggtcgcggccgcgcccgtcgcgacgccgtctccgcagctcgcgcggctgctc
gccgagcgcgccgagcgcgagcgcgggcggcgcttcgccgccccgacccgtgtgcccgcg
tcgcgcttcaaggactacgtcgccgactacaccggcacgatctcgcagatcgcccgcccg
atgccggaacggccgtaccagcagacgcgcatcggcacgctgttccaccagtgggtcgag
gcgcgctcggggacgaccggctcgagcgccgccatcgacgacgccctgtgggagacggac
gaggaggtctgggacgagggccgcgacaccgaggtgtcggcggccgacgaggcggcgctc
gagcgcttgcgcgagacgttcctgcagagcgagtgggcgcgcctgcgcccgctggccgtc
gagacggagatcgacttcccgctgccgagcatcgacggcgcgcccgagcacatcgtcatc
tgcaagctcgatgccgtgtacctccgcgacgatcgagggggccggatcgagatcgtggac
tggaagaccggccgcgcgccgcgcactccggccgagcgggaggcgcggatgctgcagctc
gcgctgtaccggctcgcgtaccaccgtcgacacggggtgccgctcgaggacatcgacgtc
acgctctactacgtcgccgacgacctcgtgctgcgagacgagcgggtgctcaccgcggag
gaggtggcgcggcgctggcaggccgctcagcggggctga
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