Microbacterium oryzae: D7D94_02180
Help
Entry
D7D94_02180 CDS
T09900
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
moj
Microbacterium oryzae
Brite
KEGG Orthology (KO) [BR:
moj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
moj03016
]
D7D94_02180
Enzymes [BR:
moj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
D7D94_02180
Transfer RNA biogenesis [BR:
moj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
D7D94_02180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QGU26620
UniProt:
A0A6I6E247
LinkDB
All DBs
Position
complement(491791..493230)
Genome browser
AA seq
479 aa
AA seq
DB search
MPCSRGVLPITRRPARPRRSSRRASGRWRTRATARRSSCAPPGRRSAPSARTWRHGPSSC
ACWRGCRPAQRTSPCSAPGGSVTDYPVIDSADAFEAAVERLAAGTGPVAVDVERASGFRY
SQRAYLIQLYRRDGGVVLVDPIAVPDVTAIQRLLGDEEWVFHAASQDLPSLRELGLDPRR
IFDTELAARLLGWERVGLGAVVEAALGISLAKAHSAADWSTRPLPREWVEYAALDVLHLI
DVRDRLAAELEAAGKTEFARQEFQATLDRQPKAPRADPWRRLSGLHKVRGRRGLAVAREL
WRSREELAQQQDVSPGRLVPDRALLAAVLAMPRTKQALAGLKEFTGRASRTQLDRWWDAI
VAGRETEDLPAERVPSDSLPPHRAWAERHPDADARLKRARPEVEAKAAELDMPTENLLTP
ETLRRVAWEPPAPITAESIAAALREQGAREWQIEATAEVIADAFVRPAQTPGEDAAAAS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgccctgcagtcgcggggtgctccctatcactcgccgtccggctcggccacgaagatcc
tctcgaagggcttcgggtcgctggcggacgagggcgacggcgcgcagatcgagctgcgcg
cctcctggtcgccgatcggctccttccgcgcgcacgtggaggcatgggccgagctcgtgt
gcatgctggcggggctgccgcccggctcagaggacatcgccgtgttcggcgcccggaggt
tccgtgactgactaccccgtgatcgacagcgccgacgcgttcgaggccgccgtcgagcgt
ctcgccgccggcaccggccccgtcgcggtcgacgtggagcgcgcatccggcttccgctac
tcgcagcgggcgtacctcatccagctgtaccggcgcgacggcggggtcgtcctcgtcgac
ccgatcgccgttcccgacgtcaccgccatccagcgcctcctcggcgacgaggagtgggtc
ttccacgccgcgagccaggacctgccgtcgctgcgcgagctcggtctcgatccgcgccgc
atcttcgacaccgagctcgccgcgcgcctgctgggctgggagcgcgtgggcctgggagcc
gtcgtcgaggccgcgctcggcatctccctggccaaggcgcactccgccgcggactggtcg
acccgccccctcccccgtgagtgggtcgagtacgcggcgctcgacgtgctgcacctcatc
gacgtccgcgaccggctcgccgccgagctcgaggccgccggcaagacggagttcgcgcgc
caggagttccaggcgaccctcgaccggcagccgaaggccccgcgggccgacccgtggcgg
cgtctgagcggtctccacaaggtgcgcggacgccgtggtctcgcggtcgcccgcgagctg
tggcgctctcgggaggagctggcccagcagcaggacgtctcccccggccgcctcgtgccc
gaccgcgcgctgctggcggcggtgctcgccatgccccgcacgaagcaggcgctcgccggg
ttgaaggagttcaccgggcgcgcgagccgcacgcagctcgaccggtggtgggatgccatc
gtcgccggccgggagaccgaggatctgccggccgagcgcgtgccgagcgactccctgccc
ccgcaccgcgcctgggccgaacggcaccccgacgccgacgcgcgcctcaagcgggcccgg
cccgaggtggaggcgaaggccgcggagctggacatgcccacagagaacctcctcaccccg
gagacgctgcgccgggtcgcctgggagccgcccgcgccgatcaccgccgagagcatcgcg
gcggcgctgcgcgagcagggcgcgcgggagtggcagatcgaggcgaccgccgaggtcatc
gccgacgcctttgtgcgccccgcgcaaacacccggagaggacgccgccgccgcttcgtag
DBGET
integrated database retrieval system
