Microbacterium oryzae: D7D94_05505
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Entry
D7D94_05505 CDS
T09900
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
moj
Microbacterium oryzae
Pathway
moj03030
DNA replication
moj03430
Mismatch repair
moj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
moj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D7D94_05505
03430 Mismatch repair
D7D94_05505
03440 Homologous recombination
D7D94_05505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
moj03032
]
D7D94_05505
03400 DNA repair and recombination proteins [BR:
moj03400
]
D7D94_05505
Enzymes [BR:
moj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D7D94_05505
DNA replication proteins [BR:
moj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D7D94_05505
DNA repair and recombination proteins [BR:
moj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D7D94_05505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QGU27180
UniProt:
A0A6I6E421
LinkDB
All DBs
Position
complement(1177529..1181041)
Genome browser
AA seq
1170 aa
AA seq
DB search
MPSDSFVHLHVHSEYSMLDGAAKLTAMTQAAADYAMPAIAVTDHGNTFAAYEFYKAAKSS
GVKPIIGLEAYVTPGTHRSDKSRVQWGSPDQKSDDVSGSGAYTHMTMWSETTQGMHNLFR
LSSRSSMEGYYFKPRMDRELLQTYGKGLIATTGCPSGEIQTRLRLGQYDAARAAAAEFQD
IFGKENYFAEIMDHGLSIERRVMTDLLRLSKDLGIPLVATNDSHYTHQHEADAHAALLCV
QSGSTLDDPNRFKFDGDGYYIKTAQEMRQLFRDHPEACDNTLLIAERCEVEFNTSANYMP
RFPVPDGETEESWFVKEVEKGLHYRYPNGVPDASRKQAEYEIGIITQMGFPGYFLVVADF
INWAKDNGIRVGPGRGSGAGSMAAYAMRITDLDPLEHGLIFERFLNPDRVSMPDFDVDFD
DRRRGEVIDYVTAKYGSERVAQIVTYGTIKSKQALKDAGRVLGFPFSMGERLTKAMPPAV
MGKDMPLDGMFNPEHPRYKEASEFRTVIETDPEARTVFDRAVGLEGLKRQWGVHAAGVIM
SSEPLIDIIPIMRREQDGQIVTQFDYPACESLGLIKMDFLGLRNLTILSDALDNIRTNRG
EELDLEHLPLDDRGAYDLLSRGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVIALYRPG
PMGANSHTNYALRKNGQQDITPIHPELEEPLRDILDTSYGLIIYQEQVMAIAQKVAGFSL
GQADILRRAMGKKKKSELDKQYEGFAGGMKERGFGEGAIKALWDILLPFSDYAFNKAHSA
AYGVVSYWTAYLKAHYPAEYMAAVLTSVGDSRDKLAMYLNECRRMGIRVLPPDVSESIGF
FAAVGDDIRFGLGAIRNVGSNVVDGIISARADGPYSDFHDFLRRVPMHVANKRTVESLIK
AGAFDTMGSTRRALLEIHEQAVESAVTDKRNAAGGAIGFDFDSLWDEPEAVQKVPERPEW
TKKDKLAFEREMLGLYVSDHPLAGLEVPLAKHRSITISDLLASEDLQDGDQVTVAGLVTS
AQHRVAKSSGNPYGMITVEDFDGEVTVMFMGKTYVEFQPILQQDSVLAVRGRVSRRDDGL
NLHAQMAFVPDVGALEVSGPLTLLLPEQRATEQVVEDLADMLRRHRGETEVRLKMHRGRT
AKVFEVPLPVSITAELFGDLKALLGPQCIA
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctgactccttcgtccacctgcacgtgcacagcgagtactcgatgctcgacggg
gcggcgaagctcaccgcgatgacgcaggccgccgcggactacgccatgccggcgatcgcg
gtgaccgaccacggcaacacgttcgcggcgtacgagttctacaaggccgccaagtcgtcc
ggcgtgaagccgatcatcgggctcgaggcctacgtcacgcccggcacgcaccgcagcgac
aagtcgcgcgtgcagtggggctcgcccgatcagaagagcgacgacgtctcgggatccggc
gcgtacacccacatgaccatgtggagcgagacgacgcagggcatgcacaacctgttccgg
ctgagctcgcgctcgagcatggaggggtactacttcaagccgcgcatggaccgcgagctg
ctgcagacgtacggcaagggcctgatcgcgacgaccggatgcccgtcgggcgagatccag
acccgcctgcgcctcgggcagtacgacgccgcacgcgcggcggccgcggagttccaggac
atcttcggcaaggagaactacttcgccgagatcatggaccacggcctctccatcgagcgc
cgggtcatgaccgacctcctgcggctgtcgaaggacctcgggatcccgctcgtggccacc
aacgactcgcactacacgcaccagcacgaggccgacgcgcatgccgcgctcctctgcgtg
cagtccggctcgaccctcgacgacccgaaccgcttcaagttcgacggcgacgggtactac
atcaagaccgcgcaggagatgcgccagctcttccgcgaccacccggaggcgtgcgacaac
acgctcctcatcgccgagcgctgcgaggtcgagttcaacacctcggcgaactacatgccg
cgcttcccggttccggatggcgagaccgaggagagctggttcgtcaaggaagtggagaag
ggactccactaccggtacccgaacggcgtccccgacgcctcccgcaagcaggccgagtac
gagatcggcatcatcacccagatgggcttcccggggtacttcctcgtcgtcgccgacttc
atcaactgggccaaggacaacggcatccgcgtcggtccgggccgcggctcgggtgcgggg
tcgatggccgcctacgcgatgcgcatcaccgacctcgacccgctcgagcacggcctcatc
ttcgagcgcttcctcaaccccgaccgtgtctcgatgcccgacttcgacgtcgacttcgac
gaccggcgccgtggcgaggtcatcgactacgtcaccgcgaagtacggctccgagcgcgtg
gcgcagatcgtcacgtacggcaccatcaagtcgaagcaggccctgaaggacgccggccgc
gtcctcggcttcccgttcagcatgggcgagcgcctcacgaaggcgatgccgccggccgtg
atgggcaaggacatgccgctcgacggcatgttcaaccccgagcacccccggtacaaggag
gcgagcgagttccggacggtcatcgagaccgaccccgaggcgcgcaccgtcttcgaccgc
gcggtcggcctcgagggactgaagcgccagtggggcgtgcacgccgctggcgtgatcatg
tcgagcgagccgctcatcgacatcatcccgatcatgcgccgcgagcaggatggccagatc
gtcacgcagttcgactatccggcctgcgagtcgctgggtctcatcaagatggacttcctc
gggctgcggaacctgaccatcctgtcggacgccctcgacaacatccggacgaaccggggg
gaggagctcgacctcgagcacctgccgctcgacgaccgcggtgcctacgacctcctgtct
cgaggcgacaccctcggcgtcttccagctcgacggcgggccgatgcggtcgctgctgcgc
ctcatgaagcccgacaacttcgaggacatctccgccgtcatcgcgctgtaccgtccggga
cccatgggcgcgaactcgcacacgaactacgccctgcgcaagaacgggcagcaggacatc
acgcccatccaccccgagctcgaggagccgctgcgcgacatcctcgacaccagctacggc
ctcatcatctaccaggagcaggtgatggccatcgcgcagaaggtggccggcttcagcctc
ggccaggccgacatcctccgccgcgcgatgggcaagaagaagaagtcggagctcgacaag
cagtacgagggcttcgcgggcggcatgaaggagcgcggcttcggcgagggcgcgatcaag
gcgctgtgggacatcctgctgcccttctccgactacgcgttcaacaaggcgcactccgcc
gcatacggcgtggtgtcgtactggaccgcgtacctcaaggcgcactatccggccgagtac
atggcggccgtgctcacgagcgtcggcgactcgcgcgacaagctcgcgatgtacctcaac
gagtgccggcggatgggcatccgcgtgctcccgccggacgtctcggagtcgatcggcttc
ttcgcagccgtcggcgacgacatccgcttcggcctgggcgccatccgcaacgtcggctcc
aacgtcgtcgacggcatcatctccgcgcgcgcggacggtccgtactcggacttccacgac
ttcctccggcgcgtgcccatgcacgtggcgaacaagcggacggtcgagtcgctcatcaag
gcgggcgccttcgacaccatgggatcgacgcgccgcgcgctgctggagatccacgagcag
gccgtcgagtccgccgtcaccgacaagcgcaacgccgccggcggcgccatcggcttcgac
ttcgacagcctgtgggacgagccggaggccgtgcagaaggtgccggagcgcccggagtgg
acgaagaaggacaagctcgcgttcgaacgcgagatgctcggactctacgtctccgaccat
ccgctcgccggtctcgaggtgccgctggcgaagcaccgctcgatcacgatcagcgaccta
ctcgcctccgaggacctgcaggacggcgaccaggtcaccgtggcggggctcgtcacgagc
gcgcagcaccgcgtggcgaagtcgagcggcaacccgtacggcatgatcaccgtcgaggac
ttcgacggcgaggtcaccgtcatgttcatgggcaagacgtacgtcgagttccagccgatc
ctgcagcaggactcggtcctcgcggtgcgcggccgcgtctcgcggcgcgacgacggactg
aacctgcacgcgcagatggcgttcgtgcccgacgtgggagcgctcgaggtctccggtccg
ctgacgctgctcctccccgagcaacgggccaccgagcaggtcgtcgaggacctcgccgac
atgctgcgccgtcatcgcggcgagaccgaggtgcggctgaagatgcatcgcggccgcacg
gcgaaggtgttcgaggtgccgcttcccgtgtcgatcacggcggagctgttcggagatctg
aaggcgctcctcggcccgcagtgcatcgcctga
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