Microbacterium oryzae: D7D94_06325
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Entry
D7D94_06325 CDS
T09900
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
moj
Microbacterium oryzae
Pathway
moj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7D94_06325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moj03019
]
D7D94_06325
03016 Transfer RNA biogenesis [BR:
moj03016
]
D7D94_06325
Enzymes [BR:
moj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D7D94_06325
Messenger RNA biogenesis [BR:
moj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D7D94_06325
Transfer RNA biogenesis [BR:
moj03016
]
Prokaryotic type
tRNA degradation factors
D7D94_06325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QGU27325
UniProt:
A0A6I6DQV1
LinkDB
All DBs
Position
complement(1355545..1357821)
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AA seq
758 aa
AA seq
DB search
MEGPEITAAEAVLDNGRFGTRTIRFETGRLAQQAQGAVAAYLDEETMLLSATSASKNPRE
GFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVDGLRNEIQ
IVVTVLSIAPGEFYDALAINAASASTQISGLPFSGPIAGVRLALIPGQAGNDDQWVAFPN
AELLESAVFDLVVAGRVVQGADGSEDVAIMMVEAEATEASWNLIKAGATKPSEEIVAQGL
EASKPFIKQLVAAQAEMAAKSSKAPLEFPVFPAYSQETYDFVAGEAYADLEKVYLIADKQ
ERQSADDEVKARVKAALVEKVEAGELPAAAPLEFGAAYKSVTKKIVRGRILTEGVRMDGR
GLADIRPLDAEVQVIPRVHGSAIFQRGETQIMGVTTLNMLKMEQQIDSLSPTTSKRYMHH
YNFPPYSTGETGRVGSPKRREIGHGFLAERALAPVLPTREEFPYAIRQVSEALGSNGSTS
MGSVCASTLSLLNAGVPLRAPVAGIAMGLVSDEVDGQTRYAALTDILGAEDALGDMDFKV
AGTRDFVTAIQLDTKLDGIPSEVLAGALTQAKDARLRILEVLNAAIDTPDEMAPTAPRVI
SVQIPVDKIGELIGPKGKTINSIQDDTGAQISIEDDGTVYIGATDGPSAEAARAAVNAIA
NPTNPEIGDQFLGTAVNIAKFGVFVSLLPGKDGLLHVTELRKLNGGKRVENIEEVVSVGQ
KILVRISKIDDRGKLSLEIVDESAESAEAPAAEAPAEA
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggtcctgaaatcaccgccgccgaggccgttctcgacaacggccgcttcggcacc
cgcacgatccgcttcgagaccgggcgcctcgcgcagcaggctcagggcgcggtcgccgcg
tacctcgacgaggagacgatgctcctctccgcgacgagcgcgtcgaagaacccccgcgag
ggcttcgacttcttcccgctgacggtcgacgtcgaggagcgctcgtatgccgcgggcaag
atccccggctcgttcttccgccgcgagggacgcccctccaccgaggccatcctcgtgtgc
cgcctcatcgaccgtccgctgcgcccgtcgttcgtcgacggcctccgcaacgagatccag
atcgtcgtgacggtgctctccatcgctcccggtgagttctacgacgctctcgcgatcaac
gccgcctcggcgtcgacgcagatctcgggtctgccgttctccggcccgatcgccggcgtg
cgcctcgcgctcatccccggccaggccggcaacgacgaccagtgggtcgcgttccccaac
gccgagctgctcgagtcggccgtgttcgacctcgttgtcgccggtcgcgtggtccaggga
gccgacggctccgaggacgtcgcgatcatgatggtcgaggccgaggccaccgaggccagc
tggaacctcatcaaggccggcgccaccaagcccagcgaggagatcgtcgcgcagggtctg
gaggcctcgaagcccttcatcaagcagctcgtcgcggcgcaggccgagatggccgccaag
tcgtcgaaggctccgctggagttccccgtcttcccggcctacagccaggagacctacgac
ttcgtcgcgggtgaggcgtacgccgacctcgagaaggtctacctcatcgccgacaagcag
gagcgtcagagcgccgacgacgaggtcaaggcccgcgtcaaggccgccctggtcgagaag
gtggaggcgggcgagctccccgccgccgctccgctcgagttcggcgccgcctacaagtcg
gtcacgaagaagatcgtgcgcggccgcatcctcaccgagggcgtgcgcatggacggccgc
ggtctcgcggacatccgcccgctcgacgccgaggtgcaggtcatcccgcgcgtgcacggc
tccgcgatcttccagcgcggcgagacccagatcatgggcgtcaccacgctgaacatgctc
aagatggagcagcagatcgactcgctgtcgcccacgacgagcaagcgctacatgcaccac
tacaacttcccgccctactcgaccggtgagaccggccgggtcggcagcccgaagcgtcgc
gagatcggccacggcttcctggccgagcgcgcgctcgctcccgtgctgcccacgcgcgag
gagttcccctacgccatccgccaggtgtcggaggccctcgggtccaacggctccacgtcg
atgggctccgtctgcgcctcgaccctgtcgctgctgaacgcgggtgtgccgctgcgcgca
cccgtcgccggcatcgcgatgggcctcgtgtccgacgaggtcgacggccagacgcgctac
gccgcgctgaccgacatcctcggcgccgaggacgctctcggcgacatggacttcaaggtg
gccggcacgcgcgacttcgtcacggccatccagctggacacgaagctcgacggcatcccc
tccgaggtgctcgccggcgcgctcacgcaggcgaaggacgcgcgcctgcgcatcctcgag
gtgctgaacgccgcgatcgacacgccggacgagatggcgcccaccgcgccccgcgtcatc
agcgtgcagatcccggtcgacaagatcggcgagctgatcggccccaagggcaagacgatc
aactcgatccaggacgacaccggcgcgcagatctcgatcgaggacgacggcaccgtctac
atcggcgcgaccgacggcccctccgccgaggctgcccgcgcggccgtcaacgcgatcgcg
aacccgaccaacccggagatcggcgaccagttcctcggcaccgccgtgaacatcgccaag
ttcggcgtgttcgtctcgctgctcccgggcaaggacggcctgctgcacgtcaccgagctg
cgcaagctcaacggcggcaagcgcgtggagaacatcgaggaggtcgtgagcgtgggtcag
aagatcctcgtccgcatctccaagatcgacgaccgcggcaagctctcgctggagatcgtc
gacgagtcggcggagtccgccgaggcgccggcagccgaggctcccgccgaggcctga
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