Microbacterium oryzae: D7D94_06710
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Entry
D7D94_06710 CDS
T09900
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
moj
Microbacterium oryzae
Pathway
moj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7D94_06710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moj03019
]
D7D94_06710
03400 DNA repair and recombination proteins [BR:
moj03400
]
D7D94_06710
Enzymes [BR:
moj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D7D94_06710
Messenger RNA biogenesis [BR:
moj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D7D94_06710
DNA repair and recombination proteins [BR:
moj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D7D94_06710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
MFS18
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QGU27393
UniProt:
A0A6I6DX63
LinkDB
All DBs
Position
complement(1445217..1447310)
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AA seq
697 aa
AA seq
DB search
MTDDALRTSALVALRRLVGRDDADFHEGQYEAIEALVGGRRRALVVQRTGWGKSAVYFVA
TRLLRDAGAGPTVLVSPLIALMRDQIAAAQRAGVRAVAINSTNAHEWTEVLAQLDADEVD
VLLVSPERLNNPSFRDEQLPALVRRIGMLVVDEAHCISDWGHDFRPDYRRLRDLIAQMPP
TVPVLATTATANSRVVADVVEQLGADGVTTIRGPLARSSLRLSVLRLPDATARLAWLLSH
LDELPGSGIIYTLTVAAANDTARLLRDHGHEVRAYTGQSDADERAESEAMLKRNEVKALV
ATSALGMGFDKPDLGFVLHLGAPSSPVAYYQQVGRAGRATESADVVLLPGPEDRDIWHYF
ATASMPDQERAERVLSALRDAHGPLSTVALEALVDIRRTPLELLLKVLDVDGAVRRERGG
WVATGEPWTYDAERYDRIAAERRAEQEHMLEYQTTTACRMEFLQRRLDDDTAEPCGRCDN
CAGPWLSAEIGQAVSASAASALDRVGVPIEPRRQWPSGLDRLGVPLKGRIPAEQQAAEGR
ALARLTDLGWGGALRELFAAGAPDQPVPQRLLDACVRVLAGWGWQERPVAVVSVPSRSRP
QLVASTAQGIAGIGRLPYLGALALDPAAPVGRPGGNSAFRVADLHGHLSAAGVDVPAGPV
LLVDDLADSRWTLTLAARELRAAGATAVLPFALGLRA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgacgccctgcgcacatccgctctcgtcgccctgcgccggctcgtcggccgg
gacgacgccgacttccacgagggacagtacgaggcgatcgaagcgctcgtcggcgggcgg
cgccgagcgctcgtcgtccagcgcaccgggtggggcaaatcggcggtgtacttcgtcgcc
acacgcctgctccgcgacgccggagcggggccgaccgtcctcgtctcgccgctcatcgct
ctcatgcgcgatcagatcgccgccgctcagcgcgcgggcgtgcgggccgtcgccatcaac
tccaccaacgcgcacgagtggaccgaggtcctcgcacagctcgacgccgacgaggtcgac
gtcctcctcgtctcgcccgagcggctcaacaacccgtcgttccgcgacgagcagctgccc
gccctcgtgcgccgcatcggcatgctcgtcgtcgacgaggcgcactgcatcagcgactgg
gggcacgatttccgacccgactaccggcgcctccgcgacctgatcgcgcagatgccgccg
acggtgcccgtcctcgccacgaccgcgaccgccaacagccgcgtggtcgccgacgtcgtc
gagcagctgggggcggatggcgtcaccacgatccgcggaccgctcgcgcgatcctcgctg
cggctgagcgtcctccggcttcccgacgcgacggcccgcctggcctggctgctcagccac
ctcgacgagctgccgggttcgggcatcatctacaccctcaccgtggccgcggcgaacgac
accgcgcggctcctccgcgaccacggccacgaggtgcgcgcctacaccgggcagagcgac
gccgacgagcgcgcggagtcggaggccatgctcaagcgcaacgaggtgaaggcgctcgtc
gcgacgagcgcgctcggcatggggttcgacaagcccgacctcggcttcgtgctgcatctc
ggggcgccgtcgtcgccggtcgcgtactaccagcaggtggggcgcgcgggccgtgcgacg
gagtccgccgacgtcgtgctgctccccggcccggaggatcgcgacatctggcactacttc
gccaccgcgtcgatgcccgaccaggagcgggccgagcgcgtgctgtccgcgctccgcgat
gcgcacgggccgctctcgaccgtcgccctcgaggcgctcgtcgacatccgccgcacgccg
ctcgagctgctgctgaaggtgctcgacgtcgacggggccgtgcgccgcgaacggggcgga
tgggtcgcgaccggcgagccgtggacgtacgacgccgagcgctacgaccgcatcgcggcc
gagcgccgcgccgagcaggagcacatgctcgagtaccagacgacgaccgcgtgccgcatg
gagttcctgcagcgccggctcgacgacgacaccgccgaaccctgcggccggtgcgacaac
tgcgcggggccgtggttgtccgccgagatcgggcaggccgtgtcggcgtcggccgcgtcc
gcgctcgaccgcgtcggggtgcccatcgagccgcggcgccagtggccctcgggtctcgac
cggctcggcgtgcccctcaaaggacgcatccccgccgagcagcaggccgcggaggggcga
gcgctcgcacgcctcaccgacctcggctggggcggcgccctccgcgagctcttcgccgcg
ggcgctcccgaccagccggtgccgcagcgtctgctcgacgcgtgcgtgcgcgtgctcgcc
gggtggggatggcaggagcggccggtcgccgtcgtgtccgttccctcgcgctcgcgtccg
cagctcgtcgcctcgaccgcgcagggaattgccggcatcggacgcctgccctacctcggc
gcgctcgcgctcgaccccgccgcgccggtcggacgcccgggcggcaacagcgccttccgc
gtcgcggacctgcatggccacctgtccgccgcgggcgtcgacgtgccggccggccccgtg
ctcctcgtcgacgacctcgccgacagccgctggacgctgaccctcgccgcccgcgaactc
cgcgcggccggagcgacggccgtgcttccgttcgccctgggcctgcgcgcctga
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