Microbacterium oryzae: D7D94_09430
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Entry
D7D94_09430 CDS
T09900
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
moj
Microbacterium oryzae
Pathway
moj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7D94_09430 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moj03019
]
D7D94_09430 (recQ)
03400 DNA repair and recombination proteins [BR:
moj03400
]
D7D94_09430 (recQ)
Enzymes [BR:
moj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D7D94_09430 (recQ)
Messenger RNA biogenesis [BR:
moj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D7D94_09430 (recQ)
DNA repair and recombination proteins [BR:
moj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D7D94_09430 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
HHH
Gln_amidase
Motif
Other DBs
NCBI-ProteinID:
QGU27857
UniProt:
A0A6I6E515
LinkDB
All DBs
Position
complement(2022537..2024528)
Genome browser
AA seq
663 aa
AA seq
DB search
MSAHLQSGPQGDPWMVARIPDDDSWVPPEEPYDEGPPEGWAPVEAAAPWSGGSVPSRPTP
SRFPSAVDALRTVYGFESFRGDQEAIVEQVIAGGDAVVLMPTGGGKSVCYQIPALVREGT
GLVVSPLIALMHDQVDALRANGVRAAYLNSTQSPEERGAVERAYVAGELDLLYVAPERLN
GEQTLRMLERGALSVIAIDEAHCVSQWGHDFRPDYLALGSLADRFPGVPRVALTATATRE
THREITERLRLPDAKHFVASFDRPNIRYRIEPKTDARKQLLQFIRSQPEGSAGIVYALSR
KSVEQVASFLAQQGIDAIPYHAGLDARVRAAHQSRFLRDDGVVVVATIAFGMGIDKPDVR
FVAHVDLPKSVEGYYQETGRAGRDGEPSVAWMAYGLGDVVQQRRMIQQGDGGRAIQQRQS
QHLDAMLALCETVSCRRQNLLGYFGQESGPCGNCDTCLEPPEVWDGQIAAQKLLSTVVRL
KRERNQSFGAGHLIDILRGASSERMRKFQHDQLSTFGIGQDLSEQDWRSVIRQLLAQGLL
AAEGEYGTLALSAASTGVLRGETPVPLRKDVIGRVARVPQRKASAADALAAEDRSLFEAL
RAWRAEQAREQGVPAYIVFGDATLRALAEHRPANPADLDGIPGIGAKKRDAYGEAVLAVI
AGG
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcatctgcagagcggccctcagggcgatccgtggatggtcgcgcgcatcccc
gacgacgacagctgggttccgcccgaagagccgtatgacgaggggccgcccgaagggtgg
gcgccggtcgaggcggccgcgccgtggagcggcgggtccgtgccttcgcggcccacgcca
tcccgcttcccctccgcggtcgacgcgctccgcaccgtctacggcttcgagtcgttccgg
ggcgaccaggaggcgatcgtcgagcaggtcatcgcgggcggcgacgcggtcgtgctcatg
ccgaccggtggcggcaagagcgtctgctatcagattcccgcgctcgtgcgcgagggaacg
gggctcgtcgtctcgcccctcatcgcgctcatgcacgaccaggtcgacgccctgcgcgcc
aacggtgtgcgtgcggcgtacctcaactccacgcagtcgcccgaagagcgcggtgcggtc
gagcgcgcgtacgtcgccggtgagctcgacctgctttacgtcgcacccgagcggttgaac
ggcgagcagacgctgcggatgctcgagcgcggcgccctcagcgtcatcgcgatcgacgag
gcgcactgcgtcagccagtggggccacgacttccggccggactacctcgccctgggctcc
ctcgccgaccggttccccggcgtcccgcgagtggcgctcacggccacggcgacgcgcgag
acccatcgcgagatcaccgagcgtctgcgcctccctgacgcgaagcacttcgtcgcgagc
ttcgaccggccgaacatccggtatcggatcgagccgaagacggatgcgcgcaagcagctg
ctgcagttcatccgctcgcagccggagggctcggcgggcatcgtctacgcgctgagccgc
aagtccgtcgagcaggtcgcgtcgttcctcgcgcagcagggaatcgacgccatcccgtat
cacgccggtctcgacgcgcgcgtgcgggctgcgcaccagtcccgcttcctgcgcgacgac
ggtgtggttgtggtcgcgaccatcgcgttcggcatgggcatcgacaagcccgatgtgcgc
ttcgtcgcacacgtcgacctgccgaagtcggtcgaggggtactaccaggagaccgggcgc
gcggggcgggatggcgagccgtccgtcgcgtggatggcctacggtctcggcgacgtcgtc
cagcagcggcggatgatccagcagggtgacggcggccgcgccatccagcagcggcagtcg
cagcacctcgacgcgatgctcgcgctgtgcgagaccgtgtcgtgccgtcggcagaacctc
ctcgggtacttcggtcaggagtccgggccgtgcggcaattgcgacacctgcctcgagccg
ccggaggtatgggatggccagatcgccgcgcagaagctgctctcgacggtcgtccggctg
aagcgggaacggaatcagtccttcggcgcggggcacctcatcgacatcctgcgtggggcg
tcgagcgaacgcatgcggaagttccagcacgaccagctgtcgacgttcgggatcgggcag
gacctgtccgagcaggactggcggagcgtcatccggcagcttctcgcgcaggggctgctg
gccgcggagggggagtacggcacactcgcgctgagcgcggcctcgaccggcgtgctgcgg
ggggagactccggtgccgctccgcaaggacgtgatcggacgcgtggcgcgcgttccgcag
cgcaaggccagcgcggccgacgcgctcgccgcggaggaccgcagtctcttcgaagcgctc
cgcgcctggcgtgcggagcaggctcgagagcagggcgttcccgcgtacattgtgttcggc
gacgcgacgctgcgcgcgctcgccgagcaccggccggcgaacccggccgacctcgacggc
atccccggcatcggcgcgaagaagcgcgacgcctacggcgaagccgtgctggccgtcatc
gctggcggctga
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