Microbacterium oryzae: D7D94_11645
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Entry
D7D94_11645 CDS
T09900
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
moj
Microbacterium oryzae
Brite
KEGG Orthology (KO) [BR:
moj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
moj03032
]
D7D94_11645
03400 DNA repair and recombination proteins [BR:
moj03400
]
D7D94_11645
Enzymes [BR:
moj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D7D94_11645
DNA replication proteins [BR:
moj03032
]
Prokaryotic type
DNA Topoisomerases
D7D94_11645
DNA repair and recombination proteins [BR:
moj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D7D94_11645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QGU28256
UniProt:
A0A6I6DVY5
LinkDB
All DBs
Position
2494415..2495425
Genome browser
AA seq
336 aa
AA seq
DB search
MPRLRRTSPQDRGWTRRRSGSGFTYLDENGERLPDEAIERIKALVIPPAWKDVWITPYPN
GHLQAVGTDDAGRRQYLYHPQWRARRDALKFDRVLDFGAALGLARPAILGELALDGMPVN
RACAAAVRMLDIGCFRIGDDVYADKNGSFGLTTLERAHVRRTGDALVFRFRGKSGVNHRI
EIADPGVVAAIETMRRRRDGEPALLAYRDATGWRRLTATLVNDYVRASTGANATAKDFRT
WHATVLAATKLAERSLELDERASATKKRKAVTATMRDVATFLGNTPTMARTSYVDPRVVS
AFDEGRTIAETVRVEHADEIARQTALEAATLSLIRD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcctccgccgcacctctcctcaggaccgcggctggacacgccgacgctcaggc
agcggcttcacctacctcgacgagaacggcgagcggctgccggatgaggcgatcgagcgg
atcaaggccctggtcatcccgcccgcctggaaggacgtgtggatcacgccctatccgaac
gggcacctgcaggcggtgggaacggacgacgccggacgtcggcagtacctgtaccacccg
cagtggcgcgcgcgtcgggatgcgctcaagttcgaccgggtgctcgacttcggcgccgcc
ctcgggctcgcgcgtccggccatcctcggcgagctcgcgctggacggcatgccggtgaac
cgcgcctgcgcggccgcggtgcgaatgctcgacatcggctgcttccgcatcggcgacgac
gtctacgccgacaagaacgggagcttcgggctcaccacgctcgagcgtgcgcacgtgcgg
cgaacgggcgatgcgctggtgttccgcttccgcggcaagtcgggtgtgaaccaccgcatc
gagatcgccgaccccggcgtggtcgccgccatcgagaccatgcgccggcgccgcgacggg
gagccggcgctgctcgcctatcgggatgcgacggggtggcgacgcctcacggcgaccctc
gtcaacgactacgtgcgcgcgtcgaccggagcgaacgccaccgcgaaggacttccgcacc
tggcacgcgacggtgctggccgcgaccaagctggccgagcgctcgctcgagctggatgag
cgcgcgagcgccacgaagaagcggaaggccgtcaccgccaccatgcgcgacgtggcgacc
ttcctcgggaacaccccgaccatggcgcgcacgtcgtatgtcgacccgcgggtggtctcg
gccttcgacgaggggcgcacgatcgccgagacggtgcgcgtcgagcacgcggacgagatc
gcgcggcagaccgcgctcgaggcggccacgctctcgctcatccgcgactga
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