KEGG   Methanothermococcus okinawensis: Metok_0416
Entry
Metok_0416        CDS       T01534                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
mok  Methanothermococcus okinawensis
Pathway
mok03030  DNA replication
mok03410  Base excision repair
mok03420  Nucleotide excision repair
mok03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mok00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Metok_0416
   03410 Base excision repair
    Metok_0416
   03420 Nucleotide excision repair
    Metok_0416
   03430 Mismatch repair
    Metok_0416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mok03032]
    Metok_0416
   03400 DNA repair and recombination proteins [BR:mok03400]
    Metok_0416
DNA replication proteins [BR:mok03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Metok_0416
DNA repair and recombination proteins [BR:mok03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Metok_0416
   MMR (mismatch excision repair)
    Other MMR factors
     Metok_0416
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Metok_0416
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 Rad9 DNA_pol3_beta_3 DUF4349
Other DBs
NCBI-ProteinID: AEH06400
UniProt: F8AKR2
LinkDB
Position
426848..427591
AA seq 247 aa
MFKATINAKDFKKIIDATSNLVDEICFEVDENGIKANAMDPSHVALVSVNIPKDTFEEYI
SDVHDIGVDLEALKKIMGRAKSNEKLTLELDEEKNKLNLILKNDAVRKFSVSLYDVSSTN
LKVPDIEYPNEVMIKAGAFVEALKDAELVNDHVSLKISEDGKFIIFSKGDINQSETIYDN
NSESILDLKITESSKSTFNLAYLKDITKATSSDDILHIYLGSDMPVKIEYNIGNAKILFL
LAPRIET
NT seq 744 nt   +upstreamnt  +downstreamnt
atgtttaaagccacaattaatgctaaggattttaaaaaaattatagatgcaacaagtaat
ttagtagatgaaatttgttttgaggtggatgaaaatggcataaaagccaacgccatggac
ccatctcatgttgcattggtaagtgtaaatattccaaaggatacctttgaagaatatatt
tccgatgtccatgatataggagttgatttagaagcccttaaaaaaataatgggacgagca
aaatctaatgaaaagctcacattggagttagatgaagaaaaaaataaattaaaccttatt
cttaaaaatgacgctgtaaggaaattttcagtttcactttatgatgtgagctctacaaat
cttaaagttcccgacatagaatatcccaatgaagtaatgattaaagcaggtgcatttgta
gaagctttaaaagatgcggaattagtaaatgaccatgtttctttaaaaataagtgaagat
ggtaagtttataatattctcaaaaggagatataaaccagagcgagaccatatatgataac
aacagtgaatccatattggatttaaaaattacagaatcttcaaagagcacatttaattta
gcttatttaaaagatattacaaaggctacatcatcagatgacattttgcatatatatctt
ggttccgatatgcctgtaaaaatagaatataatataggaaacgcaaaaatactattcctc
cttgctccaaggatagagacataa

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