KEGG   Methanothermococcus okinawensis: Metok_0485
Entry
Metok_0485        CDS       T01534                                 
Name
(GenBank) DNA-directed RNA polymerase, subunit A''
  KO
K03042  DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
Organism
mok  Methanothermococcus okinawensis
Pathway
mok03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mok00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Metok_0485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mok03021]
    Metok_0485
Enzymes [BR:mok01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Metok_0485
Transcription machinery [BR:mok03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     Metok_0485
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 Intein_splicing
Other DBs
NCBI-ProteinID: AEH06467
UniProt: F8AL31
LinkDB
Position
complement(478407..479594)
AA seq 395 aa
MTKIEEYHLLKKAVNSDVVWDEIVSIEEIIYENKYVYDISVEGLETFTTYDGILTHNTMR
TFHYAGVAELNVTLGLPRMIEIVDARKEPSTPTMTIYLTEEYKYNREKAEEIARNIESTT
VESVSDDISIDLVKSCINVILNPEQMAKRGITVDDVVESIKKKMKLKIDIEGNVLHLIIK
TPSLKALRKRIPKVKTIHLKGVPNIPRVIIRKEEGTEEYILYSEGSNLKEVFEIEGVDTT
RTTTNNILEIQDVLGIEAARNAIIDEINATLSQQGLTVDIRHLMLVADIMTVDGSVKPIG
RHGISGEKASVLARAAFEETVKHLYAAAERGYADKLNGVVENIIVGKPISMGTGCVDVYI
DREYEEGKGLILNSEKDIECNECIDENKNKNKNDE
NT seq 1188 nt   +upstreamnt  +downstreamnt
ataaccaagatagaagagtaccatctattaaaaaaggcagtaaattccgatgtagtttgg
gatgaaattgtatcaattgaggaaataatatatgaaaataaatatgtttatgatatttcg
gtagaaggtcttgaaacatttacaacatatgatggaatactaacgcacaatacaatgaga
accttccactatgcaggggttgctgagctcaacgttacactaggtcttccaaggatgatt
gaaattgtagatgcaagaaaggagccatccactcctactatgaccatatatttaacagaa
gaatataaatataatagagaaaaggcagaagaaatagccagaaatattgagagcacaacc
gttgaaagtgtttcagatgatataagtatagatttggttaaaagctgtataaatgtgata
ttaaatcctgaacaaatggctaaaagaggaattacagtagatgatgtagtggaatcaatt
aaaaagaagatgaaattaaaaatcgatattgaaggaaatgtgcttcatttgataataaaa
actccttcattaaaagcacttagaaaaagaattccaaaggtcaaaacaatacacttaaaa
ggagttccaaatatacctagggtaattataagaaaggaagaagggacagaagagtatata
ttatacagtgaaggttcaaatttaaaagaagtctttgaaatcgaaggagtagatacaaca
agaacaactacaaacaatattttggaaattcaggatgttttgggtatagaagctgcaaga
aacgcaattatagatgagataaatgcaactcttagccagcagggtcttactgtggatatt
aggcatttaatgcttgttgcagacattatgactgtggatggttctgtgaaaccaattgga
agacacggtattagtggtgaaaaagcctctgtccttgcaagagcggcttttgaagaaacc
gtaaaacatttatatgctgctgctgaaaggggatatgctgataagctaaatggtgttgta
gaaaatataatcgttggaaagcctatatccatgggaacaggatgcgttgatgtttatatc
gatagagaatatgaagaaggaaaagggttaattttaaatagtgaaaaggatatagaatgc
aacgaatgtattgatgaaaataaaaataaaaataaaaatgatgaatag

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