Methanothermococcus okinawensis: Metok_0486 Help Entry Metok_0486        CDS       T01534                                  Name (GenBank) RNA polymerase Rpb1 domain 5   KO K03042   DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] Organism mok  Methanothermococcus okinawensis Pathway mok03020   RNA polymerase Brite KEGG Orthology (KO) [BR:mok00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     Metok_0486  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mok03021]     Metok_0486 Enzymes [BR:mok01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      Metok_0486 Transcription machinery [BR:mok03021]  Prokaryotic type   Archaeal type    RNA polymerase     Core subunits      Metok_0486 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LAGLIDADG_3 Intein_splicing RNA_pol_Rpb1_5 Hom_end Spo16_C Crl Motif Other DBs NCBI-ProteinID:  AEH06468 UniProt:  F8AL32 LinkDB All DBs Position complement(479591..481069) Genome browser AA seq 492 aa AA seqDB search MVKEMELEKKLENTSLPLSLKKGLIDKITKENITDENVINDIIAETVKAYERTLVEPNEA VGVVAAQSIGEPGTQMSLPYEEEIIIKDGELIKPIKIGALVDECIEKYGYININDSEVCD LPINLYVPSLDQDEKIHWKRIISCIRHENPKKLIKIKTKSGRSITATPYHSFVIRENNKV VPVKGSDLKTGDRIPTVKHIPANCIDAISIGEYVANCGRYAIDENNNTIAPKINGKPIIN NIDLDYDFGYFIGIYLAEGHSTKYFVSISNVDEKVLEKIRKFAEKLNLSYNEYDNNSGFA KSHDIRINSSVLAEFMNKFGAHSKEKKVADFVYCAKKEFVKGVVRGYFDGDGNLNPERKV IRTYSSSKRLIDDMALLLSRFNIFSVKTIMKGQYGLIIPHRYAKAYYNEIGFTVPKKAEK LKELVESLNDENTYDSIDMIPSIGDAFQVLSDKVGYPSVYAKKFTNKQKIGRGALQKHIT KMEEIAKEKTST NT seq 1479 nt NT seq  +upstreamnt  +downstreamnt atggtgaaagaaatggaattggaaaaaaaacttgaaaatacatcattgcctctttcatta aaaaaaggacttattgataaaataactaaagaaaatatcaccgatgaaaatgtaatcaac gatataattgctgaaacagttaaagcctatgaaagaactttggttgaaccaaatgaagca gttggagttgtagcagctcagtccatcggtgagccggggacacagatgtcattaccatat gaagaggaaataataataaaagatggagagctcataaaacctataaaaatcggagctctt gttgatgaatgtatagaaaaatatggatatattaatataaatgactcagaagtttgtgat ttacctattaatttgtatgtcccaagtttagaccaggatgaaaaaatacattggaaaaga attataagctgtataagacatgaaaatcctaaaaagttaataaaaataaaaacaaaatca gggcgaagcattacagcaacaccatatcattcctttgtaataagggaaaacaataaagta gttcctgtaaaaggttctgacttaaaaactggagatagaattcctactgtgaagcatata cctgcaaactgtatagatgccataagtattggtgaatatgttgcaaattgtggaagatat gcaatagatgaaaacaacaacacaattgcaccaaaaataaacgggaagccgataataaat aatatagaccttgattatgattttggctatttcattggtatttatttagcagaagggcat tctacaaagtattttgtatcaatttctaatgtagatgaaaaagtattggagaagattaga aaatttgccgaaaaacttaatttaagttataatgaatatgataacaatagtggatttgca aaaagccatgatataagaataaactcctcagttttagccgagtttatgaataagttcgga gctcattcaaaggaaaagaaagttgcggattttgtatattgtgctaaaaaggaatttgtt aagggagtagttagaggatactttgatggagatggtaatttaaatcctgaaagaaaagtt ataaggacatattcatcttcaaaacggctaatagatgatatggcattgttgctgtcaaga tttaatatattctcagtgaaaactataatgaaagggcagtatggtttaattatacctcac agatatgcaaaagcatattataatgaaattggattcacagttcctaaaaaggcagaaaaa ttaaaggaattggttgaatcattgaacgatgaaaacacatacgattcaattgatatgatt ccatcaataggggatgcattccaggtattatctgataaagttggatatccatcggtttat gcaaagaaatttacaaataaacaaaaaattggaaggggagctcttcaaaaacatataaca aaaatggaagaaattgcaaaagaaaaaacatcgacataa

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