Methanothermococcus okinawensis: Metok_0524
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Entry
Metok_0524 CDS
T01534
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mok
Methanothermococcus okinawensis
Pathway
mok04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Metok_0524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mok03019
]
Metok_0524
03009 Ribosome biogenesis [BR:
mok03009
]
Metok_0524
04131 Membrane trafficking [BR:
mok04131
]
Metok_0524
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mok04147
]
Metok_0524
Messenger RNA biogenesis [BR:
mok03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Metok_0524
Ribosome biogenesis [BR:
mok03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Metok_0524
Membrane trafficking [BR:
mok04131
]
SNARE
SNARE associated proteins
Others
Metok_0524
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Metok_0524
Exosome [BR:
mok04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Metok_0524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
TIP49
AAA_2
AAA_5
AAA_14
AAA_22
Vps4_C
AAA_33
nSTAND3
AAA_28
AAA_lid_PRS2_C
IstB_IS21
ATPase
RNA_helicase
AAA_18
Mg_chelatase
Zeta_toxin
AAA_7
ABC_tran
DUF815
AAA_17
Sigma54_activat
AAA_25
AAA_3
NPHP3_N
TsaE
AAA_24
PhoH
ATP-synt_ab
Sigma54_activ_2
Parvo_NS1
SLFN-g3_helicase
AAA_30
Molydop_binding
RNA_pol_Rpb5_C
Motif
Other DBs
NCBI-ProteinID:
AEH06504
UniProt:
F8ALB6
LinkDB
All DBs
Position
complement(528039..530279)
Genome browser
AA seq
746 aa
AA seq
DB search
MIIIIITYIYNIGVIFMVELIVAEAYQGDVGKGIVRIDPITMEKLGLKSGDVVEIEGKSK
AYATVWRGYLEDQGKNIIRMDGILRQNAKAGIGDKVKVKKAEVKDATKIVLAPMQAVRFS
GGFEDYVKSRLAGQVVSKGSRVVIGVLGTAFPFIVVGTTPKGAVKITEYTTVELKTEPVS
ELKETKIPDISYEDIGGLREEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGK
TLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEEESPSIVFIDEIDAIAP
KRDEASGEVERRMVAQLLTLMDGLESRGQVVVIAATNRPDALDPALRRPGRFDREITIGV
PDRKGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMKTLRRLLPDID
LEKEEIPKEILDKIEVTMQDFKEALKEVEPSALREVLVEVPNVKWDDIGGLEEVKQDLKE
AVEWPLKYKEVFEKMGIRPPKGVLLFGPPGTGKTLLAKAVANESQANFISVKGPEIFSKW
VGESEKAIREIFRKARQAAPTVVFFDEIDSIAPRRGSDIGGSGVAEKVVNQLLTELDGLE
EPKDVVIIAATNRPDILDPALLRPGRLDRIVLVPVPDKKARYEILKVHTKKMPLAEDVDL
KKLAEKTEGYTGADLEAVCREAAMIALRENLKAEKVELRHFEEALKKVRPSVKKEEMNLY
KKLAEEYGRSPEAETHSKKRGIFWIP
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgattattataattattacatatatctataatatcggggtgatatttatggttgaatta
atagtagcagaagcatatcaaggggatgtgggtaaaggaatcgttagaatagaccctatc
accatggaaaaattaggtctaaaatccggagatgtagtagaaattgaaggtaaatcaaag
gcctatgcaactgtatggagaggttacttggaagaccaaggaaaaaatattataagaatg
gatggaatattaagacagaatgcaaaggcaggaattggagataaggtcaaagtaaaaaag
gcagaagttaaagatgccactaaaatcgtacttgctcctatgcaggcagtaagatttagt
gggggatttgaagactatgtaaaaagtagattggcaggacaagtagtaagcaagggttca
agggttgtaattggagttttaggaacagcatttccatttatagttgttggaactactcca
aaaggtgctgttaaaataacagaatatacaactgttgaattgaaaacagaaccagtgtca
gaactaaaagaaactaaaatacctgatatctcctatgaagatattggtggtttaagggaa
gaagttaagaaaattagggaaatggtagaacttccaatgagatatcctgaattattcgat
aaattaggtattgaaccaccaaaaggagttttgcttgctgggcctcctggaactggtaaa
acattacttgccaaagctgttgcaaatgaggctggggcaaacttttacaccataaatggt
ccagaaataatgagtaaatatgttggagaaaccgaagaaaatttaagaaagatatttgaa
gaagctgaggaagaatctccatcgatagtattcatcgacgaaatagatgcaatagctcca
aaaagagatgaagcatcgggagaagttgaaaggagaatggtagctcagcttctgacactt
atggatggtcttgaaagtagaggacaggttgtagtaattgccgcaacaaacagaccagat
gcattagaccctgcattgagaagacctggaagatttgacagagaaattaccattggagtt
ccagacagaaaaggaaggaaagaaattcttcaaatacatacaagaaatatgcctcttgca
gaagatgttgatttggactacttagcagatgttacacacggatttgttggtgcagatttg
gcagcactatgtaaagaagctgcaatgaaaacccttagaagattacttccagatattgat
ttggagaaagaggagatacctaaggaaattttagataaaattgaagtaacgatgcaggac
tttaaagaggcgttgaaggaagttgagccatctgcattaagggaagttcttgttgaggtt
ccaaatgtaaaatgggatgatattgggggattggaagaagtaaaacaggacttaaaagaa
gccgttgaatggccgttaaaatataaagaagtatttgaaaagatgggaattagacctcct
aagggagttttactgtttggacctcctggaactggtaaaacattacttgccaaggctgtt
gcaaatgaatcacaggcaaactttataagtgtaaaaggacctgaaatattctctaaatgg
gttggagaaagtgaaaaggcaataagagaaatatttagaaaggcaagacaagctgcacca
actgtggtattctttgatgagatagacagtattgctccaagaaggggctcagatattggt
ggaagcggtgtagctgagaaggtagttaatcagctattgacggagctcgatggtcttgaa
gaacctaaggatgttgtgataattgccgcaacaaacagaccagatatacttgaccctgca
ttgctgagacctggaagacttgatagaatagtattagtcccagttcctgataaaaaggca
aggtatgagatattaaaagtccataccaaaaaaatgcctcttgcagaagatgtcgatttg
aagaaacttgcagaaaaaacagaaggctacacaggagcagatttagaggcagtatgtagg
gaagctgcaatgatagcacttagggagaatttaaaagccgaaaaagttgagttaagacac
tttgaagaagcactgaaaaaagtaagaccatcagttaaaaaagaagaaatgaacctctat
aaaaagttagcagaggaatatggaagaagtcccgaagctgaaactcattcaaaaaaaaga
ggaatattctggataccatag
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