Methanothermococcus okinawensis: Metok_0541
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Entry
Metok_0541 CDS
T01534
Name
(GenBank) NusG antitermination factor
KO
K15172
transcription elongation factor SPT5
Organism
mok
Methanothermococcus okinawensis
Brite
KEGG Orthology (KO) [BR:
mok00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Metok_0541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mok03021
]
Metok_0541
03019 Messenger RNA biogenesis [BR:
mok03019
]
Metok_0541
Transcription machinery [BR:
mok03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Metok_0541
RNA polymerase I system
Metok_0541
Messenger RNA biogenesis [BR:
mok03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Metok_0541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
NusG
KOW4_SPT5
Ribosomal_uL24m-like
Motif
Other DBs
NCBI-ProteinID:
AEH06521
UniProt:
F8ALD3
LinkDB
All DBs
Position
complement(547874..548314)
Genome browser
AA seq
146 aa
AA seq
DB search
MIFAIRTTTGQEKNVAEFLASRAEKEKIDIYSILATEDLKGYILVEAPNKGAVEDLVRKT
FKVKGIVPGEISIDELEHLLSPTKIIESIDKGDVVELVAGPFKGEKAIVTRVDKHKEEIT
LELMEAAVPIPITVGIEQVKIVSKNQ
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgccattagaactacgacaggtcaggaaaaaaatgttgcagagtttttagcc
tcgagggctgaaaaagaaaagattgatatatattctatattggcaacggaggatttaaaa
ggatatatccttgtagaagctcctaataaaggggcagtagaagatttagtaagaaaaaca
tttaaagtaaagggcatagttccaggagaaatttcaattgatgagttagaacatttgtta
tctccaacaaagataatagaaagtatcgataaaggtgatgtggtagaacttgttgcagga
ccatttaaaggtgagaaggcaatagttacaagagtggataaacataaagaagagataaca
ttagagttaatggaggccgcagtgcctatacctataactgttggaattgaacaggttaaa
attgtgtctaaaaatcagtaa
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