Methanothermococcus okinawensis: Metok_0671
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Entry
Metok_0671 CDS
T01534
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mok
Methanothermococcus okinawensis
Pathway
mok03410
Base excision repair
mok03430
Mismatch repair
mok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Metok_0671
03430 Mismatch repair
Metok_0671
03440 Homologous recombination
Metok_0671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mok03400
]
Metok_0671
DNA repair and recombination proteins [BR:
mok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Metok_0671
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Metok_0671
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Metok_0671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
DHH_CID
Motif
Other DBs
NCBI-ProteinID:
AEH06649
UniProt:
F8ALX4
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All DBs
Position
679907..681313
Genome browser
AA seq
468 aa
AA seq
DB search
MPNLKRAVKTLRKNRKNNILIYTHIDTDGITTRVILEELLNRLNIEAEFRFLKGIGTNSI
EDIPFKDYDLIIFGDLGSGQLDLIKGKMEEYNLLDKTDKNIIILDHHIPANINIPKNIIN
VNPWNNNIDGGKEICGAGVSYLFAKMCNPRNIDLAKYAVLGAVGDIQNLEGKLIGLNRSI
LNDAVKSGEVVAFPDLQFYGKHTKPIFASIKYFTDVRTDLMNNDSRIINFINQINKKHDL
DIIPKENLCELSFDEKRILGSEFLSKCNRYVPPNWARFLPKVIFGESYEFKKEEIKTPFR
NLEEFSTCINACSRYEDYETPLKVLKGDRDKYYDKMKSRLNAHKRNLSKSLQYIKDNVEI
IQRDKFQYFEVKNGAIEGNIIGIVAGMSYSIEDVDWKKPIFALGELDNGYKVSARCPKLL
SFAEDINLADAISYASKKVGGSGGGHKFACGAYIPEKRDFIKYLENKL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatttaaagagagctgttaaaacccttcgaaaaaacagaaaaaataatatatta
atatatacacatatagatacggatggcatcactacgagggtaattttggaggagctccta
aatagattaaacatagaggcagaatttagatttttaaaaggtattggcactaattccatc
gaggatattccatttaaggactacgatttaataatttttggagatttaggaagcgggcaa
cttgaccttataaaaggaaaaatggaagaatataacttattggataaaacggataaaaat
ataattatattagaccaccacatacctgcaaatataaatattcctaaaaatataataaat
gtaaatccttggaataacaatatcgacggaggaaaagaaatctgtggtgctggagtatcc
tatttatttgctaaaatgtgcaatccaagaaatatagacttggctaaatatgccgttctc
ggtgcagttggagacattcaaaatttggagggaaaacttataggattaaataggagtata
ttaaatgatgcggtaaaatcgggggaggttgtagcatttccagaccttcaattttacgga
aaacatacaaaacctatttttgcatctattaagtattttacagatgtaagaaccgattta
atgaacaacgattcaagaattataaattttataaatcaaataaataaaaaacatgattta
gatataataccaaaggaaaatttatgtgagttgtcttttgatgaaaagagaattcttgga
agcgaatttttaagtaaatgcaatagatatgtcccaccaaattgggcaagatttcttcca
aaggtaatatttggggaaagttatgaatttaaaaaagaagaaataaaaacaccatttaga
aatttagaggaattttcaacctgcataaatgcctgttctcgatatgaagactacgaaacc
ccactcaaagttttaaaaggagatagagataaatattacgataagatgaaatcccgatta
aatgcccataaaagaaacctttcaaaatctctccaatatattaaagataatgttgaaata
atacaaagagataaatttcaatattttgaagttaaaaacggtgcaatagaaggtaatata
ataggtattgtggcaggtatgagttattcaatagaggatgtagattggaaaaaacccata
tttgcattaggagaactggataatggctataaagtatctgccagatgtccaaagctttta
tcctttgctgaggatataaaccttgccgatgccataagctatgcatctaaaaaagttgga
ggaagtggtggaggacataaatttgcctgcggtgcatatatcccagaaaaaagggatttt
ataaaatatcttgaaaataaattataa
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