Methanothermococcus okinawensis: Metok_0758
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Entry
Metok_0758 CDS
T01534
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mok
Methanothermococcus okinawensis
Pathway
mok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Metok_0758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mok03019
]
Metok_0758
Messenger RNA biogenesis [BR:
mok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Metok_0758
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B_2
Lactamase_B
ODP
PDEase_II
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AEH06735
UniProt:
F8AM50
LinkDB
All DBs
Position
785217..786644
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AA seq
475 aa
AA seq
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MIFILLYLAKKFRMKNKIKNKVKGSDILQLEVVAIGGYEEVGRNMTAVNVDGEIIIFDMG
LRLDRVMIHEDSDVSKMHSLNLIEMGVIPDDTVMKNIEGEVKAIVVSHGHLDHIGAITKL
AHRYNAPIIGTPYTLELVKREILSEKKFDVRNPLITLNAKETMDLTPNLSLEFIKITHSI
PDAVLPVLHTPYGAIVYGNDFKFDNIPIVGEKPDYRAIKKVGKKGVICMISESTRVNFEG
KTPSEGVAASLLKNDLLGTDNENNGVVITTFSSHIARIKSITEIAERMGRIPVLIGRSMA
KYCGIAEDIGLVEFPKNTKMAGDPTSVDRIFHQVMKEGKEKYMLVVTGHQGEEGAVLSRM
ATNKTPFRFERHDQVVFSADVIPNPMNAAQRYMLEARLKLAGVRLFKGAHVSGHAAKEDH
RDMIRWLNPEHIIPAHGDFNLTATYAKLAEEEGYRLGEDVHLLRNGQSLKFERII
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatatttatattattgtatttagcgaaaaaatttagaatgaaaaataaaataaaaaat
aaagtaaaaggaagtgatattttgcaattagaagtagtagctattggcggatatgaagaa
gtcggaaggaatatgactgctgttaatgtggatggagaaataatcatatttgatatggga
ttaagacttgatagagttatgatacatgaagacagcgatgtttcaaaaatgcatagctta
aatttaatagaaatgggtgtaattcctgatgatactgtaatgaagaatatagaaggagag
gttaaggctattgtggtttctcatggacaccttgaccacataggggctattacaaagctt
gcccatagatacaatgctcctattatcggaacaccatataccttagaactcgtgaaaagg
gaaatattaagtgaaaaaaaattcgatgtgagaaatccattgattacattgaatgcaaaa
gaaacgatggatttaactccaaatttatctttggaattcataaaaataacccacagtatt
ccagatgctgttcttccagttcttcatacaccttatggtgccattgtatatgggaatgac
tttaaatttgacaatatacctattgtaggtgaaaaaccagattaccgagcaataaaaaaa
gttggtaaaaaaggcgtaatctgcatgatttctgagagcacaagagtgaattttgaagga
aaaaccccatcagaaggtgtagcagcaagtcttttgaaaaatgatttgcttggaaccgat
aatgaaaataacggcgtggtaattacaacattttcatcccacattgcaaggataaaatct
attactgaaattgcagagcgaatgggaagaatccctgtgttaataggaaggtctatggct
aaatactgtggaatagcagaggatataggtcttgtagaatttccaaaaaatacaaagatg
gcaggagacccaacttctgttgatagaatattccatcaagtaatgaaagaaggcaaagaa
aaatacatgcttgtagttactggacaccaaggggaagaaggagcagttttatcaagaatg
gctacaaataaaactccttttagatttgaaaggcacgaccaagtggtattttcagctgat
gtaatcccaaatccaatgaatgcagcacagagatatatgttggaagctcgtttaaaattg
gctggagtaagactttttaaaggagctcatgtttcaggacatgctgctaaggaagaccac
agggacatgataagatggttaaatccagaacatataattcctgctcatggagatttcaat
ctcacagcaacctatgcaaaacttgcagaggaagagggatacaggcttggagaggatgtt
catcttctaagaaatggtcagagtttgaaatttgaaagaattatttaa
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