Methanothermococcus okinawensis: Metok_1474
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Entry
Metok_1474 CDS
T01534
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mok
Methanothermococcus okinawensis
Brite
KEGG Orthology (KO) [BR:
mok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mok03032
]
Metok_1474
03400 DNA repair and recombination proteins [BR:
mok03400
]
Metok_1474
Enzymes [BR:
mok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Metok_1474
DNA replication proteins [BR:
mok03032
]
Prokaryotic type
DNA Topoisomerases
Metok_1474
DNA repair and recombination proteins [BR:
mok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Metok_1474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Auto_anti-p27
ADK_lid
DUF1272
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
AEH07437
UniProt:
F8AK68
LinkDB
All DBs
Position
complement(1516429..1518771)
Genome browser
AA seq
780 aa
AA seq
DB search
MTDLIICEKPNVAKKIASALGNPKKKSNNGIPYYELERNGKKIIVASAVGHLFTLEEEKT
GEKKKFGEYPVFNIKWVPASTIKGKEYVQKYINTLKKLAKEADEFYIASDWDIEGELIGY
HALYYCCGKNDAKRMRFSSLTKNEIIKAYENPDRVDFGLVDAGDSRHRVDWYYGINVSRA
LMQSIRAVNRWQTMSTGRVQGPALSFLVDRELEIKKFVPKPYWVIGAHLKNELLAIHEKD
KFWDEKEANEIYNRIKDEKEAIISSIKKTKKKIKPNPPFDLGTLQREAHRIFRFSPKKTQ
EIAQKLYEMGICSYPRTSSQKLPKDDNYIKDILTKVSNHGDYKKYAELILRENRKPIEGK
KSDPAHPAIHVVDVPKELLNDDEKKLYDLIVRRTLAAFWDNAEREYINVVLNIDGENFKL
SGSRTIKEGWHEIYYFTKFDEKELPSLRKNDKIPVEKITIERKETKPPKRYTMASIIKEL
ESRELGTKATRADIVEKLVKRGYLIDDGSLKVTDLGIAVIETLKKYCPEIIDEKMTRELE
KKLDRLQKRTIKKENVLKDAENKLRAILEEVKKKEKEIGKELVEKIDTTNKSLKTVGKCE
CGGDLIIIKTKGKKRFIGCTNYPECKKTYPLPQKGRIKILNETCEICGAPIISIDNQKVC
INPECPSKISNEDKKEMEKAEKSEKICPKCGGKLVVKKGIYGAFLGCENYPKCRYTEKLN
NKTKTEKAEKVVVGKCPECGGDLIMRKGRFGEFIGCSNYPKCRYTEKIKNEKTKTKKEKK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttaataatatgtgagaaaccaaatgtagcaaaaaaaatagcaagtgctttg
ggcaatcctaaaaagaaatcaaataacggaattccatactatgaattggaaagaaatgga
aaaaaaataattgtagcttctgctgttgggcatttatttacattagaagaagaaaaaaca
ggggaaaagaaaaaatttggggaatatcctgtttttaatataaaatgggttcctgcttca
accattaaaggaaaggagtatgtccaaaaatatataaatacacttaaaaaacttgcaaaa
gaagctgatgagttttatatagcatcggactgggatattgaaggagagttaattggttat
cacgcattgtactactgttgtggaaaaaatgatgcaaaaaggatgagattttcaagttta
accaaaaatgaaattattaaggcgtatgagaatccagatagagtagatttcgggcttgtt
gatgcaggagacagtaggcatagggtagattggtattatggaataaatgtttcaagagct
ctgatgcaatccataagggctgttaatagatggcagacgatgagcacaggtagagttcaa
ggacctgctttatcgtttttagtcgatagagagctggaaataaaaaaatttgttccaaaa
ccatattgggtaatcggagctcacctaaaaaatgagctcttagcaattcatgaaaaggat
aaattttgggatgaaaaggaagccaacgaaatttacaacagaataaaggatgaaaaagag
gcaataatttcaagtatcaaaaaaactaagaaaaagataaaaccaaatccaccatttgat
ttaggaacattacaaagagaggctcacagaatatttagattttcaccaaaaaagacgcaa
gaaattgcacagaagctttatgaaatgggaatttgttcttatccaaggacgagttctcaa
aaacttccaaaggatgataattacataaaggatattctaacaaaagtttcaaaccatggc
gattataaaaaatatgccgagctcatattgagagagaacagaaagccaatagaaggtaaa
aaaagcgaccctgcacaccctgcaatacatgttgtagatgttccaaaagaactattaaat
gatgatgagaaaaaattatacgatttaattgtaagaagaacacttgcggccttttgggat
aatgcagaaagggagtatattaatgtagtgttgaatatcgatggagaaaacttcaaacta
agtggttcaagaactataaaagaaggatggcatgagatatattactttacaaagtttgat
gaaaaggagctcccaagtttaagaaaaaatgataaaatacctgttgaaaaaataaccatt
gaaagaaaggaaacaaagcctcctaaaagatatacaatggcatctattataaaggaactt
gaatcaagggaattaggaacaaaagccactagagctgacattgtggaaaaactcgtaaaa
agaggatatttaattgatgatggctctttaaaagtaactgatttgggaatagcagtaatt
gaaacccttaaaaaatactgtcccgaaataattgatgaaaagatgacaagagaattagaa
aaaaaactggatagattacagaaaagaaccataaaaaaagaaaatgttttaaaagatgct
gaaaataaattaagagccatattagaagaggttaaaaagaaagaaaaagaaattggtaag
gaattggtggaaaaaatagacactacaaataaatctttaaaaactgttggtaaatgcgag
tgtgggggggacttaataataattaaaacaaaaggcaagaagagattcataggatgcaca
aattatccagaatgtaaaaaaacctatccattgccacaaaagggaaggataaaaatatta
aatgaaacttgtgaaatatgcggagctcctataataagcatagataatcaaaaagtctgt
ataaatccagaatgtccttcaaaaatatccaacgaagataaaaaagaaatggaaaaggct
gaaaaatctgaaaaaatctgcccaaaatgtggtggaaaattggtggtaaaaaaaggaata
tatggagcatttttaggctgtgaaaattatccaaaatgtagatataccgaaaaactaaat
aataaaactaaaactgaaaaagctgaaaaagtagtggtaggtaaatgtccagagtgtgga
ggggacttaataatgagaaagggaagatttggagagtttataggatgttccaattatcca
aaatgtagatataccgaaaaaatcaaaaatgaaaaaacaaaaacgaaaaaggagaaaaaa
taa
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