Methanothermococcus okinawensis: Metok_1488
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Entry
Metok_1488 CDS
T01534
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mok
Methanothermococcus okinawensis
Brite
KEGG Orthology (KO) [BR:
mok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mok03016
]
Metok_1488
Enzymes [BR:
mok01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Metok_1488
Transfer RNA biogenesis [BR:
mok03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Metok_1488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
Ehbp
Corona_NS2A
Dpoe2NT
Peptidase_C32
Motif
Other DBs
NCBI-ProteinID:
AEH07451
UniProt:
F8AK80
LinkDB
All DBs
Position
complement(1532251..1532766)
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AA seq
171 aa
AA seq
DB search
MRCFLAIELNEDIKEKLKELSSHFKINGIKLVKMDNLHITVKFLGDIDEEMIEKIKNLDL
SIKPVKSDIKHIGVFPNENYIRVIWVGVTNLIPIFKKIDEKLSELGFKKEKDYIPHITIG
RVKFIKDKKLLKNKIDKYKHTELGTIEVKNIVLMKSELTREGPIYEVIKKW
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgagatgctttttagcaattgaattaaatgaagatattaaagaaaaacttaaagaacta
tcatctcattttaaaattaacggcattaaattggttaaaatggataatcttcacataact
gttaaatttttgggagatattgacgaagaaatgattgagaaaataaaaaatttagattta
tccattaaacctgttaaaagtgatataaaacatattggcgtttttccaaatgaaaattac
ataagggtaatatgggtaggagttactaatttaatacctatattcaaaaaaattgatgaa
aaactttcagaattgggatttaaaaaagaaaaggactatatcccacatataactattgga
agggtcaaatttatcaaggataaaaaattactaaaaaataaaattgataagtataaacat
acggagctcggcactattgaggttaaaaatatcgttttgatgaaaagtgaattaacaaga
gaaggtccaatttatgaagtaattaaaaaatggtaa
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