Methanobrevibacter olleyae: YLM1_0105
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Entry
YLM1_0105 CDS
T04385
Name
(GenBank) cell division control protein Cdc48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mol
Methanobrevibacter olleyae
Pathway
mol04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
YLM1_0105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mol03019
]
YLM1_0105
03009 Ribosome biogenesis [BR:
mol03009
]
YLM1_0105
04131 Membrane trafficking [BR:
mol04131
]
YLM1_0105
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mol04147
]
YLM1_0105
Messenger RNA biogenesis [BR:
mol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
YLM1_0105
Ribosome biogenesis [BR:
mol03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
YLM1_0105
Membrane trafficking [BR:
mol04131
]
SNARE
SNARE associated proteins
Others
YLM1_0105
Autophagy
Aggrephagy
Other aggrephagy associated proteins
YLM1_0105
Exosome [BR:
mol04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
YLM1_0105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_2
RuvB_N
AAA_16
CDC48_2
AAA_14
AAA_22
TIP49
AAA_33
AAA_lid_PRS2_C
AAA_5
nSTAND3
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_3
Zeta_toxin
Sigma54_activat
AAA_17
AAA_7
AAA_24
ABC_tran
NB-ARC
Parvo_NS1
DUF815
Bac_DnaA
SLFN-g3_helicase
Viral_helicase1
IstB_IS21
PhoH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AMK14665
UniProt:
A0A126QZ52
LinkDB
All DBs
Position
133797..136010
Genome browser
AA seq
737 aa
AA seq
DB search
MADVEIKTKVAETLSQKDVGKNIAKLDMESMFKLGLKDGDLIEIIGSKNTAAIAIASQSD
METIVRIDGTTRKNSGASIGEEVTIKRAEAKEAKKIVLAPIDARIRIGGDLNRAFRNQIM
VQGDLINTGIKTPQRRSSMGGGFFDDIFDDMMNVPGIGAMSQIKLAVVSTNPGGVVKVGP
NTKVEINEEPVDVSKLDGVSNLVDISYDDIGGLKEEVKKVREMIEIPLKKPELFDKLGIA
PPKGVLMHGPPGTGKTLLAKAVANESDAHFIVINGPEIMSKYVGGSEENLREFFEEAEEN
APSIIFIDELDAIAPKREETQGEVERRTVAQLLTLMDGLNSRGQVVVIGATNRPDSLDGA
LRRPGRFDREIEIGVPDKEERKEIMEIHTRGMPLDEDVDLDDLADTTHGFVGADLEALAK
EAAMRVVRRIIPDLGADDEIPPEVLEKLVVTKDDFKSALREIQPSALREVLVQVPNVVWD
DVGGLDEAKQELKEAVEWPLKYPDKFKEFGVRPPKGTLLYGIPGTGKTMLAKAVANESEA
NFIAIKGPELLSKWVGESEKGVREVFRKARQTAPTVIFFDEIDSIASSRGAESGDSGVTK
RVVNQLLTEIDGLEELEDVAIIAATNRPDIIDPGLMRPGRFDRHIKVDTPNEEARLAIFK
VHTKDMPLAKDVKLKKLAKNTEGYVGADIEAVCREAAMLSLRDNIEASEVSAKFFDEAME
KVKPKSVSDEEELIQYY
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgtagaaattaaaaccaaagttgcagaaacattatctcaaaaagatgttggt
aagaatattgctaaattagatatggaatctatgtttaaacttggccttaaagatggagat
ttaatagaaattatcggatctaaaaatactgcagctatcgcaattgcctctcaatctgat
atggaaacaattgttaggatagatggtactactcgtaaaaattcaggtgcttcaataggt
gaagaagtcactattaaaagagcagaagcaaaagaagctaaaaagattgttctcgctcct
attgatgcaagaattagaattggtggagacttgaatagggcatttagaaaccagataatg
gttcaaggtgacttaataaatactggaattaaaactcctcaaagaagaagctctatgggt
ggaggatttttcgatgatatctttgacgatatgatgaatgttccaggtattggtgcaatg
agccaaatcaaattagcagttgttagtacaaatcctggaggagttgttaaagttggacca
aacactaaagtagaaatcaatgaagagccagttgatgtttctaaattagacggtgtttct
aatcttgtagatattagttacgatgatattggaggcttaaaagaggaggttaaaaaggta
agagagatgattgaaattcctcttaaaaagccggaattatttgataaattaggtattgct
cctccaaagggagttttaatgcatggacctccaggtactggtaagacattacttgcaaag
gctgtagcaaatgaaagtgatgctcactttattgtaattaatggtcctgaaatcatgagt
aaatatgtcggtggctctgaagagaacttaagagaattctttgaagaagcagaagaaaat
gcaccatccattatatttattgatgagttggatgctattgcacctaaacgtgaagaaact
caaggtgaagtggaaagaagaactgttgcacaacttttaaccttgatggatggacttaat
tcaagaggtcaagtggttgttatcggtgcaacaaataggccagattcccttgatggtgca
cttagaagacctggtaggtttgatcgtgaaatcgaaattggtgtacctgataaagaggaa
cgtaaagaaatcatggaaatccatacaagaggaatgcctcttgatgaagatgttgattta
gatgatttggcggataccactcatggttttgtaggtgcagaccttgaagcattagctaaa
gaagcagctatgagagttgtaagaagaatcattccggacttaggtgctgatgatgagatt
ccacctgaagttttagaaaaacttgtagtaactaaagatgactttaaatctgcacttaga
gaaattcaaccatctgctttaagagaagttcttgtacaagttccaaacgttgtttgggat
gatgttggtggattggatgaagctaaacaagaattgaaagaagctgtagaatggcctctt
aaatatccagataaatttaaagaatttggtgtaaggccaccaaaaggtactttattatat
ggtattccaggtactggtaaaaccatgcttgcaaaggctgtagcaaatgaaagtgaagct
aacttcattgcaattaaaggaccagaactcttatctaaatgggttggtgagtctgagaaa
ggtgtaagagaagtctttagaaaagcaagacaaactgctcctactgtaatattcttcgat
gaaattgattctattgcaagttcaagaggagcagaatctggtgattctggagtaactaaa
cgtgttgtaaatcaattattaactgaaatcgatggtcttgaagagttagaggatgttgca
attattgcagctacaaacaggccggatattattgatccaggtcttatgaggccaggtaga
tttgatagacatattaaagttgacactcctaatgaagaggcaagacttgcaatatttaaa
gttcacactaaggatatgcctcttgccaaagatgtaaaacttaaaaaattagctaaaaat
accgaaggatatgttggagcagatattgaagcagtttgccgtgaggctgcaatgttatct
ttaagggataatatagaagctagcgaagtttcagcaaaattcttcgatgaagctatggaa
aaagtgaagccaaaaagtgtaagtgatgaagaagagttaatccaatattactaa
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