Methanobrevibacter olleyae: YLM1_0475
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Entry
YLM1_0475 CDS
T04385
Name
(GenBank) DNA-directed RNA polymerase subunit D RpoD
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mol
Methanobrevibacter olleyae
Pathway
mol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
YLM1_0475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mol03021
]
YLM1_0475
Enzymes [BR:
mol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
YLM1_0475
Transcription machinery [BR:
mol03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
YLM1_0475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
Calycin_like
Motif
Other DBs
NCBI-ProteinID:
AMK15032
UniProt:
A0A126QZ39
LinkDB
All DBs
Position
557171..557998
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AA seq
275 aa
AA seq
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MKIDVKEQDENSMTFKVYDVEVPFINAIRRIAMMKVPKLAIDDVFVVKNDSAMFDEVLAH
RLGLTPLVSDEKSIEGLVLPEDCDCDCEKGEYCPRCSVSFSLRETGPKTVYSKDLKSCGD
SKIKPVYDTIPLLKLREGQSVDLEAVAKLGIGKDHAKWVPTTVCSYKQYPEITFNEDEEV
IYAAADNCPRGVLKADKEEGRIDIVDIENCSLCKTCVRTAKAADSKFINVGYRENDFIFK
VETDGSIPPKEVLLKACDVLDSKTDEFITFSEGGI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgatgtcaaagaacaagatgaaaattctatgacttttaaagtttatgatgta
gaagttccttttattaatgctattagaagaattgctatgatgaaagtaccaaaattagct
attgatgatgtatttgtagttaaaaatgattctgcaatgtttgatgaagtattagctcat
agattaggtttaactcctttagtttctgatgaaaaatctattgaaggattagtgcttcct
gaagattgtgactgtgattgtgaaaaaggagaatactgtccaaggtgcagtgtttcattt
tctttaagagaaactggacctaaaactgtatattctaaggatttaaaatcttgtggtgac
tcaaaaattaaaccagtatacgataccatacctcttttaaaattaagagagggtcaaagt
gttgatttagaagctgtagcaaaattaggaattggtaaagaccatgcaaaatgggtacca
actactgtttgttcttataagcaatatcctgaaataacttttaatgaagatgaagaagtt
atttatgcagctgcagataattgtcctagaggagtattaaaagctgacaaagaggaagga
agaattgatattgttgatattgaaaactgttctctttgtaaaacttgtgtaagaacagca
aaagcagctgattctaaatttatcaatgttggttatcgtgaaaatgattttatttttaaa
gttgaaactgatggatcaatacctcctaaagaggttttattaaaagcttgtgatgtttta
gattctaaaacagatgagtttatcacatttagtgaaggaggaatctag
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