Methanobrevibacter olleyae: YLM1_1081
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Entry
YLM1_1081 CDS
T04385
Name
(GenBank) transcription initiation factor TFIIB Tfb
KO
K03124
transcription initiation factor TFIIB
Organism
mol
Methanobrevibacter olleyae
Pathway
mol03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mol00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
YLM1_1081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mol03021
]
YLM1_1081
Transcription machinery [BR:
mol03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
YLM1_1081
Prokaryotic type
Archaeal type
TFB
YLM1_1081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_11
Sigma70_r4
Lar_restr_allev
HTH_Tnp_ISL3
HTH_Mga
A2L_zn_ribbon
RB_B
Sigma70_r4_2
HTH_8
DUF7368
HTH_AsnC-type
Zn_ribbon_IS1595
Zn_ribbon_Elf1
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
AMK15638
UniProt:
A0A126R0N2
LinkDB
All DBs
Position
complement(1301267..1302286)
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AA seq
339 aa
AA seq
DB search
MSFSETIIKNNVLGSKIYFNEELREKEYSSILKHKSRNKKSSKSDKNETDAFTCPVCGSN
KVFFDRVRFEKLCRDCGLVLEENIIDSTIRGTSRDNEGNSYSQNGAPSDIAIHDGGLSTS
FDVHKGNLKNRHRWYRLRKVHNQSRVRGSRERNLSRAFSELSLLISNLSLSRAVKNESAS
IYRKALDKDLVRGRSINKLMIATVYIACRQCRVPRTLDEMAEVTSVDKKTIGKNYRFLLR
ELGLKLPIVSPTDYIPRFASKLALSSNVEVKSIEIINQAKGLGLSSGKDPASIAATVLYG
SAILLGERKTQTEVASTLGVTEVTIRNRLKELNAELDFI
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagctttagtgaaacaataattaaaaacaatgtattaggcagtaaaatttattttaat
gaggaacttagggaaaaagaatattcatctatcttaaaacataaatctagaaataagaaa
tcttctaaatctgataaaaatgaaactgatgcattcacatgccctgtatgtggatctaat
aaagttttctttgaccgtgttcgctttgaaaaattatgtagggattgtggcttagttctt
gaggagaacattattgattctacaatcagaggaacctctagagacaatgaaggtaattcc
tacagtcaaaatggagcacctagtgatatagccattcatgatggcggattatctacaagt
tttgatgttcataaaggaaacttaaaaaatagacatagatggtatcgcttaagaaaagta
cataatcaatcccgtgtaagggggtctcgtgaaagaaatttatctagagcatttagtgaa
ttgtctttattgatttctaatttatccctttctagagctgtgaaaaatgaatctgcatct
atttatagaaaagcattagataaagatttagttagaggtagaagtattaataaacttatg
attgctacagtttacattgcatgtagacagtgtagagtgccacgtactttagatgaaatg
gctgaagttactagtgttgataaaaagactattggtaaaaattacagattcttattaaga
gaattaggattaaaattacctattgtttctccaactgattacattccaagatttgcaagt
aaattagctttatcttcaaatgttgaagttaaatcaattgaaattattaatcaagcaaaa
ggtttaggattaagttcaggtaaagacccagcaagtattgcagctacagtattatatggg
tctgctatcttacttggagaacgtaaaacccaaactgaagtagcaagcactcttggtgta
actgaagttacaattagaaatagattaaaagaattaaatgctgaattagactttatataa
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