Modestobacter sp. L9-4: KUM42_02410
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Entry
KUM42_02410 CDS
T10178
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mom Modestobacter sp. L9-4
Brite
KEGG Orthology (KO) [BR:
mom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mom03032
]
KUM42_02410
03400 DNA repair and recombination proteins [BR:
mom03400
]
KUM42_02410
Enzymes [BR:
mom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KUM42_02410
DNA replication proteins [BR:
mom03032
]
Prokaryotic type
DNA Topoisomerases
KUM42_02410
DNA repair and recombination proteins [BR:
mom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KUM42_02410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QXG77823
LinkDB
All DBs
Position
complement(500872..501858)
Genome browser
AA seq
328 aa
AA seq
DB search
MHAKGWTRRRAGRSFAYYDSDGVLIRDERLDRLRSLAIPPAWKDVWICPWPNGHIQAVGT
DAAGRRQYRYHDEWRVKRDAAKHERVLEISRELPDVRDAVVAALRTRGLNRDRVLACAVR
LLDLGAFRIGSEQYAEDNHTYGLATLRREHVSVRGERVFFHYRAKHGIEREVELLDRPTA
TVVRALLERPADQGEELLGYPLEDGSWHDITSDEINAYLKEISGAEITAKDFRTWSATVL
MAATLAEQPKPAGKTARNKVVKQAYVRVSEQLGNTPTVAKNSYVDPRVVDRWEHGESVAD
ALAEAAQAPDDRTAQRTIEAAVCAMLTP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgccaagggctggaccaggcggcgcgccgggcgcagcttcgcctactacgactcc
gacggcgtcctgatccgtgacgagcggctggaccggctccggtcgctggccatcccgccg
gcctggaaggacgtctggatctgcccctggcccaacggccacatccaggccgtcggcacc
gacgccgcgggccggcggcagtaccgctaccacgacgagtggcgggtcaagcgggacgcc
gccaagcacgagcgggtgctggagatctcccgcgagctgcccgacgtccgggacgcggtg
gtcgccgcgctgcgcacccgcgggctcaaccgggaccgcgtgctggcctgcgcggtgcgg
ctgttggacctgggcgccttccggatcggcagcgagcagtacgccgaggacaaccacacc
tacgggctggccacgctgcgccgcgagcacgtctcggtccgcggcgagcgggtcttcttc
cactaccgggccaagcacggcatcgagcgtgaggtcgagctgctggaccggcccaccgcc
accgtcgtccgggcgctgctggagcgccccgccgaccagggcgaggagctgctgggctac
ccgctcgaggacggcagctggcacgacatcaccagcgacgagatcaacgcctacctcaag
gagatcagcggcgcggagatcaccgccaaggacttccgcacctggagcgccaccgtgctg
atggcggccacgctggccgagcagccgaagccggcgggcaagaccgcccgcaacaaggtg
gtcaagcaggcctacgtgcgggtcagcgagcagctgggcaacaccccgacggtggcgaag
aacagctacgtggacccgcgggtggtcgaccggtgggagcacggggagtccgtcgcggac
gcgctggccgaggccgcgcaggcccccgacgaccgcaccgcccagcgcacgatcgaggcc
gccgtctgcgcgatgctcaccccctga
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integrated database retrieval system
