Modestobacter sp. L9-4: KUM42_04505
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Entry
KUM42_04505 CDS
T10178
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mom Modestobacter sp. L9-4
Pathway
mom00300
Lysine biosynthesis
mom00470
D-Amino acid metabolism
mom01100
Metabolic pathways
mom01110
Biosynthesis of secondary metabolites
mom01120
Microbial metabolism in diverse environments
mom01230
Biosynthesis of amino acids
Module
mom_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mom00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KUM42_04505 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KUM42_04505 (dapF)
Enzymes [BR:
mom01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KUM42_04505 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QXG76814
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Position
complement(977454..978350)
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AA seq
298 aa
AA seq
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MIDSDPRVLLGHGTENDFVVLPDPDGTVWPEERLDAELVRRLCDRRAGLGGDGVLRVVRS
VHVPDAPAVLGAALEDCEWFMDHRNADGSHAEMCGNGIRLYLHVLLAEGLLDRAAAEAGV
LVGTRGGPRRVGARPDGGYWVDMGPAVPLGRSAARIAGVAYPGSGVSMGNPHLVCLTHVE
VDTLDLTALPGVDPAMFPDGVNVEMVNILAATDAPTGASAHVRLRVYERGVGETRSCGTG
ACAAAYATLQAGGRTAGTVSVDVPGGRLEVAFDGTATVLSGPAVVVATGVLTREWLAG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacagcgacccgcgggtgctcctgggccacggcacggagaacgacttcgtcgtc
ctgcccgaccccgacgggacggtgtggccggaggagcgcctggacgcggagctggtgcgc
cggctctgcgaccggcgggccgggctcggcggcgacggcgtcctgcgggtggtccgcagc
gtgcacgtgcccgacgcccccgccgtcctcggtgcggcgctggaggactgcgagtggttc
atggaccaccgcaacgccgacggctcgcacgccgagatgtgcggcaacgggatccggctg
tacctgcacgtgctgctggccgaggggctgctggaccgggcggccgccgaggccggtgtg
ctggtcggcacccgcggcggcccgcgccgggtgggtgcgcgccccgacggcggctactgg
gtggacatgggccccgccgtcccgctcgggcgcagcgcggcccggatcgccggcgtggcg
taccccgggtcgggggtctcgatgggcaacccgcacctggtctgcctcacccacgtcgag
gtggacaccctcgacctcaccgcgctccccggcgtcgacccggcgatgttcccggacggc
gtcaacgtcgagatggtcaacatcctggcggcgaccgacgcccccaccggtgcctccgcg
cacgtccggctgcgggtgtacgagcgcggcgtgggggagacccggtcctgcggcaccggc
gcctgcgccgccgcctacgccaccctgcaggccggcggccggaccgccgggacggtctcg
gtggacgtcccgggcggccggctcgaggtggcgttcgacgggacggcgacggtgctctcc
ggccccgccgtcgtcgtggccaccggcgtgctcacccgggagtggctcgcgggctga
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