Modestobacter sp. L9-4: KUM42_05720
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Entry
KUM42_05720 CDS
T10178
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mom Modestobacter sp. L9-4
Pathway
mom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUM42_05720 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mom03021
]
KUM42_05720 (rho)
03019 Messenger RNA biogenesis [BR:
mom03019
]
KUM42_05720 (rho)
Transcription machinery [BR:
mom03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KUM42_05720 (rho)
Messenger RNA biogenesis [BR:
mom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KUM42_05720 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QXG77027
LinkDB
All DBs
Position
complement(1245797..1248268)
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AA seq
823 aa
AA seq
DB search
MSETTDLLDGAPSDEAAAGNGAAARSRRRGTGLAGMLLPELQRLAGELGIPGTGKMRKSD
LVAAISERQVGESGSNGSAAPAAEHTPAPRADSTPADAGSDSAPSSAPTTDSAAVDTAAV
DNAPTGGVATSAAPLEAPVSGGANGGPVTGAPEQTTNDSSSDGAPTGRRRRGASRPAGAP
TTDTVETPAEPAAADEAPVQAGARDAQAETRTDGERPPRTRRERAARDGGDRPARDGGER
PARDGGERPARDGGERPARDGAERPARDGGERPARDGGERPARDGGERPARDGGERPARD
SGDRDERGPREDRTRDAARDGGRDGAGRENARDGEERGGRNRNRTDGARTGNDGARDGRE
GARDGARDGRDGARDGRDGARDSRDGARTDAPRADRDARPDEDDDDFDGRGRRGRRYRDR
NRRGGTTTGGRERFDSGEPAVSDDDVLLPVAGILDVLDSYAFVRTSGYLTGPNDVYVSLA
QVRRYGLRRGDAITGAVRQPREGEKKDKYNALVRLESVNGLDPEQAKDRPEFTKLTPLYP
QDRLRLETESHLMTTRVMDLVMPIGKGQRALIVSPPKAGKTMVLQSIANAIAVNNPEVHL
MVVLVDERPEEVTDMQRSVKGEVIASTFDRPPADHTTVAELSIERAKRLVEMGHDVVVLL
DSITRLGRAYNLAAPASGRILSGGVDSTALYPPKRFLGAARNIENGGSLTIIASALVETG
STMDTVIFEEFKGTGNAELKLDRRLADKRVFPAVDVNASSTRKEEILLSPDELAIVIKLR
RVLSALEPQQALELLLDRMRKTRNNIEFLMQVQKTTLGLGEKE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagaccaccgacctcctcgacggcgcaccgtccgacgaggcagccgccggcaac
ggagcggccgcccgctcccgccgccgcggcaccggcctggccgggatgctgctgcccgag
ctgcagcgcctggccggcgagctgggcatccccggcaccggcaagatgcgcaagagcgac
ctcgtcgccgccatctccgagcggcaggtgggcgagtccggcagcaacggctccgccgcc
cccgccgctgagcacacccccgcgccgcgcgccgacagcaccccggccgacgccggctcg
gacagcgcccccagcagcgcacccaccaccgacagcgccgccgtcgacaccgccgccgtc
gacaacgcgcccacgggtggcgtcgcgacctcggccgcgccgctcgaggcgccggtcagc
ggtggcgccaacgggggcccggtcaccggcgcccccgagcagaccacgaacgacagcagc
tccgacggcgcccccaccggccgtcgccgccggggtgccagccgcccggccggcgccccc
accaccgacaccgtcgagacgccggccgagccggccgccgccgacgaggccccggtccag
gccggcgctcgcgacgcccaggccgagacccgtaccgacggtgagcgcccgccgcggacc
cgccgcgagcgcgccgcccgtgacggtggcgaccgtccggcccgtgacggtggcgagcgt
ccggctcgtgatggtggcgagcgtcccgcccgcgatggtggcgagcgtccggctcgtgac
ggtgccgagcgtcccgcccgcgatggtggcgagcgtccggcccgtgacggtggcgagcgt
ccggcccgcgatggtggcgagcgtccggcccgcgatggtggcgagcgtccggcccgtgac
agtggcgaccgcgacgagcgtggcccccgcgaggaccgcacccgtgacgcggcgcgggac
ggcggccgcgacggcgccggccgggagaacgcccgggacggcgaggagcgcggcggccgc
aaccgcaaccgcaccgacggcgcccgcaccggcaacgacggtgcccgcgacggccgtgag
ggagcccgggacggtgcccgcgacggccgggacggtgcccgcgacggccgggacggtgcc
cgcgacagccgcgacggtgcccgcaccgacgccccgcgcgccgaccgcgacgcccgcccc
gacgaggacgacgacgacttcgacggccgtggccgccggggccgccggtaccgcgaccgc
aaccggcgcggtggcaccaccaccggtggccgtgagcgcttcgactccggcgagccggcc
gtcagcgacgatgacgtcctgctgccggtcgccggcatcctggacgtgctcgacagctac
gccttcgtgcgcacctccggctacctgaccggcccgaacgacgtctacgtctccctggcc
caggtgcgccgctacggcctgcgccgcggtgacgcgatcaccggtgcggtccgccagccc
cgcgagggcgagaagaaggacaagtacaacgccctcgtccggctcgagtcggtcaacggc
ctggaccccgagcaggccaaggaccgcccggagttcaccaagctgaccccgctctacccg
caggaccgtctgcggctggagaccgagtcgcacctgatgaccacccgggtcatggacctg
gtcatgccgatcggcaagggccagcgcgccctgatcgtcagcccgccgaaggccggcaag
accatggtgctgcagtcgatcgccaacgccatcgcggtgaacaaccccgaggtccacctc
atggtcgtgctcgtcgacgagcggcccgaggaggtcaccgacatgcagcgctcggtgaag
ggcgaggtcatcgcctcgaccttcgaccggccgccggccgaccacaccacggtcgccgag
ctctccatcgagcgggccaagcgcctggtcgagatgggccacgacgtcgtcgtcctgctg
gactcgatcacccggctgggccgcgcctacaacctggcggcccccgccagcgggcgcatc
ctctccggtggtgtcgactccacggcgctctacccgccgaagcgcttcctcggtgccgcc
cgcaacatcgagaacggcggctcgctgacgatcatcgcctcggcgctggtcgagaccggc
tccacgatggacacggtcatcttcgaggagttcaagggcaccgggaacgccgagctcaag
ctcgaccgccggctggccgacaagcgggtcttccccgccgtcgacgtgaacgcctccagc
acgcgcaaggaggagatcctcctgtccccggacgagctggcgatcgtgatcaagctgcgc
cgggtgctgtcggcgctggagccccagcaggcgctggagctgctgctcgaccgcatgcgc
aagacccgcaacaacatcgagttcctcatgcaggtccagaagacgaccctgggcctgggc
gagaaggaataa
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