Modestobacter sp. L9-4: KUM42_06935
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Entry
KUM42_06935 CDS
T10178
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mom Modestobacter sp. L9-4
Pathway
mom03420
Nucleotide excision repair
mom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KUM42_06935 (pcrA)
03430 Mismatch repair
KUM42_06935 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mom03400
]
KUM42_06935 (pcrA)
Enzymes [BR:
mom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KUM42_06935 (pcrA)
DNA repair and recombination proteins [BR:
mom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KUM42_06935 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KUM42_06935 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
QXG77244
LinkDB
All DBs
Position
complement(1517153..1519444)
Genome browser
AA seq
763 aa
AA seq
DB search
MSSSQISLPGTEAISRQATGQVGRELERMLAGLNGPQRQATVHEGSPLLIVAGAGSGKTR
VLTHRIAYLLGARGVQPGEIMAITFTNKAAGEMKERVAHLVGPRARAMWVSTFHSMCVRI
LRAEAAKLGMKTSFTIYDQGDSVRLMTMVARDLDLDSKRYPGRSLANQVSNLKNELVDEE
SYAPETAPEKVLKEAYTLYQRRLREAHAMDFDDLIMTTVHLLQAFPDVAEHYRRRFRHVL
VDEYQDTNHAQYVLVRELVGTAGGPVPPAELCVVGDADQSIYAFRGATIRNIDEFERDYP
EATTILLEQNYRSTQRILRAANQVIARNTARRPKNLWSEAGDGELIEGYVSDNEHDEAAW
VAEQIDALTDEGLAQPKDIAVFYRTNNASRVFEEVFIRVGMPYKVVGGVRFYERREVRDA
VAYLKVVANPADVVSLRRVLNTPKRGIGERAESAVERFADRERIPFAAALRRTSEIGELA
TRSAKAIAEFVALLEEFEQLVETGSGPAALLESILDRTGYLTELSASTDPQDEGRVDNLN
ELVSVAAEFEAANPGGTVTDFLEQVSLVADADQIPVTGDEAGVVTLMTLHTAKGLEFPVV
FLTGLEDGVFPHMRALGDPRELEEERRLAYVGITRARQRLFLSRATVRTNWGQPAYNPPS
RFLDELPMDAVHWSGSQPVSASPMSSAQSRVAATGLSTGGLRGGAGNRPVINVEIGDRVS
HDAFGLGTVVEINGAGDKAQATVDFGSGGTKRLVLRYAPLVKL
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctcgcagatctccctccccggcaccgaagcgatctcccgccaggcgaccggc
caggtcggccgcgagctggagcggatgctcgccggcctcaacggcccgcagcgccaggcc
accgtgcacgagggcagcccgctgctcatcgtcgccggcgccggctcgggcaagacccgg
gtgctgacccatcggatcgcctacctgctgggtgcccgcggggtgcagcccggcgagatc
atggcgatcaccttcaccaacaaggccgccggggagatgaaggagcgcgtcgcccacctc
gtcggcccgcgcgcccgggcgatgtgggtgtcgacgttccactcgatgtgcgtgcggatc
ctgcgtgccgaggccgccaagctcggcatgaagacctcgttcaccatctacgaccagggc
gactcggtccggctcatgacgatggtggcccgcgacctggacctggacagcaagcgctat
cccggccgcagcctggccaaccaggtgtcgaacctgaagaacgagctcgtcgacgaggag
tcctacgccccggagaccgcgccggagaaggtgctcaaggaggcgtacacgctctaccag
cgccgcctccgcgaggcccacgcgatggacttcgacgacctgatcatgaccacggtccac
ctgctgcaggccttccccgacgtcgccgagcactaccggcgccggttccggcacgtgctg
gtcgacgagtaccaggacaccaaccacgcccagtacgtgctggtgcgcgagctcgtgggc
accgccggtggccccgtgccgccggccgagctgtgcgtcgtcggtgacgccgaccagtcg
atctacgccttccgcggcgcgacgatccgcaacatcgacgagttcgagcgcgactacccc
gaggccaccacgatcttgctggagcagaactaccgctccacgcagcggatcctgcgcgcg
gccaaccaggtcatcgcccgcaacaccgcccggcgtccgaagaacctgtggtccgaggcc
ggcgacggcgagctgatcgagggctacgtctccgacaacgagcacgacgaggccgcctgg
gtcgccgagcagatcgacgcgctcaccgacgagggcctggcccagcccaaggacatcgcg
gtcttctaccgcaccaacaacgcctcccgcgtcttcgaggaggtgttcatccgggtcggc
atgccctacaaggtcgtcggcggcgtgcgcttctacgagcgccgcgaggtccgggacgcc
gtcgcctacctcaaggtcgtcgccaaccccgccgacgtcgtcagcctgcgccgggtgctc
aacacgcccaagcgcggcatcggtgagcgggccgagtccgccgtcgagcggttcgccgac
cgcgagcggatccccttcgccgcagccctgcgccggacgtcggagatcggcgagctggcc
acccggtcggccaaggcgatcgcggagttcgtcgcgctgctggaggagttcgagcagttg
gtcgagaccggctccggtccggccgcgctgctggagagcatcctcgaccgcaccggctac
ctcaccgagctctcggccagcaccgacccgcaggacgagggccgcgtcgacaacctcaac
gagctggtctcggtggccgcggagttcgaggcggccaaccccggcggcaccgtcaccgac
ttcctcgagcaggtctccctcgtggccgacgccgaccagatcccggtcaccggcgacgag
gccggcgtcgtgacgctgatgacgctgcacaccgccaagggcctggagttcccggtcgtc
ttcctcaccggcctcgaggacggcgtcttcccgcacatgcgtgccctcggcgacccgcgc
gagctggaggaggagcgccggctggcctacgtgggcatcacccgcgcccgccagcggctg
ttcctgtcccgggccacggtgcgcaccaactgggggcagccggcctacaacccgccgtcc
cggttcctcgacgagctgccgatggacgccgtccactggtcgggctcccagccggtgagc
gcctcgccgatgagctcggcgcagtcccgggtcgccgcgaccgggctgtccaccggcggg
ctgcgcggcggtgcgggcaaccgcccggtgatcaacgtcgagatcggcgaccgggtcagc
cacgacgcgttcgggctcggcaccgtcgtggagatcaacggtgccggcgacaaggcgcag
gccaccgtcgacttcgggtccggcggcaccaagcggctcgtgctccgctacgccccgctc
gtcaagctctga
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