Modestobacter sp. L9-4: KUM42_08140
Help
Entry
KUM42_08140 CDS
T10178
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mom Modestobacter sp. L9-4
Brite
KEGG Orthology (KO) [BR:
mom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mom03019
]
KUM42_08140 (hrpA)
Enzymes [BR:
mom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KUM42_08140 (hrpA)
Messenger RNA biogenesis [BR:
mom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KUM42_08140 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
AAA_22
DEAD
AAA_19
WHD_HA2
nSTAND3
T2SSE
ABC_tran
nSTAND_NTPase5
NACHT
TsaE
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QXG77462
LinkDB
All DBs
Position
complement(1750196..1754146)
Genome browser
AA seq
1316 aa
AA seq
DB search
MTTPHDDLRSRLSALTLSDEHRLGRRLDGTRRTRDLAVRAKQTEQIAAEVAAAEQRVARR
RDAVPVVSYPEELPVSQRRDDIAEALRDSQVVVIAGETGSGKTTQLPKILLELGRGVRGR
IGHTQPRRIAARTVAERIAEELGSPLGDVVGFKVRFTDDVGDRTLVKLMTDGVLLAEVQR
DRLLRQYDTIIIDEAHERSLNIDFLLGYLARLLPRRPDLKLVITSATIDVDRIAKHFSVD
GAAVPVVEVSGRIYPVEVRYRPVIDPDDEDADPDRDQVTAIVDACAELVAEGPGDVLVFL
AGEREIRDTADALNERGFPLTEVLPLYSRLSAADQHKVFQPHTGRRIVLATNVAETSLTV
PGIKYVVDPGTARISRYSHRTKVQRLPIEAISQASARQRSGRCGRTSEGIAIRLYTEADF
EARPEYTDPEILRTNLASVLLQMASLDLGDVAEFPFIDPPDRRAIADGVALLEELDALDA
AGGLTPTGRSLATLPLDPRLARMVVEADRRGVLEEVLVIAAGLTVQDVRERPAEHQQAAD
EQHKRFADENSDFIGLLNLWRYLEERAEELSGNQFRRTVKKEFLHYLRIREWQDLHGQLR
STARRLGMTLGELAPAPDERGVTAALLSGLLSQVGMQVEPVKDRSGKPGRPGREYMGTRN
TRFVLAPGSPLAKKPPRWVVAAELVETSRLFARTVARIDPETVEKLADHLVHRQYSEPRW
DAKRGSVVATERVTLYGLPLVVGRRVQYGSIDPVVSRELFIRHALVQGEWTTHHRFAADN
ARTIERVAELEERARRRDIRVDDETVFELYDARVPADVVSTRHFDRWWKEARRTTPDLLT
FTPEMLTNAAVAGQVQLEDYPDEVQLTQGLTLPLSYAFAPGAEQDGVTVDVPLGVLDTVA
ARTSGESLAFTVPGQRAELVTELLRSLPKQLRRGLVPIPDRVREVLPKIDPTEALLPALE
RELRRATSVVIPPDAWRPAEVPPHLRATYRVLDDSQRLLAQGKDLTALRTQVAPQARASL
ARAASTYERSRQTTWTFGELPETVEVERGGHVVTAFLALVDEGETVGVRVVPTQAEATRM
SWRGARRLLELVVSSPVKQVVKGIGPRSRLALQFNPDGEIPDLVADCVDAAADELIAAAG
GPPRTEAAFAALVATARTELHTLTSDAVRRVEAVLTQARETAIAIGAAPGRRVPEAAIAD
LRAQMGGLLHRGFVATAGRRRLPDLVRYLKAMELRLDKLPANAARDALLMAQVEAVTKEY
EQLRAAVPATGAPDDAVMRVRWMVEELRVGLFAQTVGTPRPVSEQRIYKAIDAVSV
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccccgcacgacgacctccggtcccggctgtccgcactgaccctgagcgacgag
caccgcctcggtcggcggctggacggcacccggcgcacgagggacctcgcggtccgcgcg
aagcagaccgagcagatcgccgccgaggtggcggcggccgagcagcgcgtcgcccgccgc
cgggacgccgtcccggtcgtgagctacccggaggagctgccggtcagtcagcggcgcgac
gacatcgccgaggcgctgcgcgactcgcaggtggtcgtcatcgccggggagaccggctcg
ggcaagaccacgcagctgccgaagatcctgctggagctcggccgtggcgtccggggccgg
atcgggcacacccagccgcgacggatcgccgcgcgcaccgtcgccgagcggatcgccgag
gagctgggcagcccgctgggcgacgtcgtcggcttcaaggtccggttcaccgacgacgtg
ggcgaccggacgctggtcaagctgatgaccgacggcgtcctgctcgccgaggtgcagcgc
gaccggctgctgcgccagtacgacacgatcatcatcgacgaggcgcacgagcggagcctc
aacatcgacttcctgctgggctacctcgcccggctgctgccccgccgtcccgacctcaag
ctggtcatcacctcggcgaccatcgacgtcgaccggatcgccaagcacttctccgtcgac
ggcgccgcggtgccggtggtcgaggtcagcgggcgcatctatccggtcgaggtccgctac
cgcccggtcatcgacccggacgacgaggacgccgaccccgaccgcgaccaggtcaccgcg
atcgtcgacgcctgcgccgagctggtggccgagggccccggcgacgtgctggtcttcctg
gccggtgagcgcgagatccgcgacaccgcggacgccctcaacgagcgtgggttcccgctc
accgaggtgctgccgctctactcgcggctgagcgcggccgatcagcacaaggtcttccag
ccgcacaccggacggcggatcgtgctggccaccaacgtcgccgagacgtcactgacggtt
ccgggcatcaagtacgtcgtcgacccgggcaccgcgcgcatctcccggtacagccatcgc
acgaaggtgcagcggctgccgatcgaggcgatcagccaggcctcggcgcggcagcgctcg
ggccgctgcgggcgcaccagcgagggcatcgccatccggctctacacggaggccgacttc
gaggcccgccccgagtacaccgaccccgagatcctgcgcaccaacctggcctcggtgctg
ctgcagatggcctcgctcgacctcggcgacgtcgccgagttccccttcatcgacccgccg
gaccgccgcgcgatcgccgacggcgtggcgctgctggaggagctcgacgccctcgacgcc
gccggcgggctcaccccgaccggccgctcgctggcgaccctgccgctggacccgcggctg
gcccggatggtcgtggaggccgaccggcgcggggtgctggaggaggtgctggtcatcgcc
gccgggctcaccgtgcaggacgtgcgcgagcgcccggccgagcaccagcaggccgccgac
gagcagcacaagcggttcgccgacgagaactccgacttcatcggcctgctcaacctctgg
cgctacctggaggagcgggccgaggagctgtcgggcaaccagttccgccgcaccgtgaag
aaggagttcctccactacctgcgcatccgcgagtggcaggacctgcacggccagctgcgc
agcaccgcccgccggctgggcatgaccctcggcgagctggcgccggcgcccgacgagcgc
ggcgtgaccgccgccctgctctcgggcctgctctcccaggtcggcatgcaggtcgagccc
gtgaaggaccggtccggcaagcccggccgtccgggccgtgagtacatgggcacccgcaac
acccgcttcgtgctggccccgggctcgccgctggccaagaagccgccgcgctgggtggtc
gccgccgagctggtggagaccagtcggctgttcgcccgcaccgtcgcgcggatcgacccc
gagacggtcgagaagctggccgaccacctggtgcaccggcagtacagcgagccgcgctgg
gacgccaagcgcggctcggtcgtcgccaccgagcgggtcaccctctacggcctgccgctg
gtggtgggccgccgggtgcagtacggctcgatcgacccggtggtctcccgcgagctgttc
atccggcacgcgctggtgcagggggagtggacgacgcaccaccgcttcgccgccgacaac
gcccgcacgatcgagcgggtcgccgagctggaggagcgcgcccgccgccgcgacatccgg
gtggacgacgagacggtgttcgagctctacgacgcccgggtgcccgccgacgtcgtctcc
acccggcacttcgaccgctggtggaaggaggcccggcgcacgaccccggacctgctgacc
ttcaccccggagatgctcaccaacgccgccgtcgccgggcaggtgcagctggaggactat
cccgacgaggtgcagctgacccagggactgaccctgccgctgtcctacgcgttcgccccg
ggtgcggagcaggacggcgtaaccgtcgacgtgccgctgggcgtgctggacaccgtggcc
gcgcggacgtcgggggagtcgctggcgttcacggtgcccgggcagcgggccgagctggtc
accgagctgctgcggtcgctgcccaagcagctgcgccgcgggctggtgccgatcccggac
cgggtgcgcgaggtgctgccgaagatcgacccgacggaggcgctgctgccggcgctggag
cgcgagctgcgccgggccacgtcggtggtcatcccgccggacgcctggcgcccggcggag
gtgccgccgcacctgcgcgccacctaccgggtgctcgacgactcccagcgcctgctcgcc
cagggcaaggacctcaccgcgctgcgcacccaggtcgcgccgcaggcccgggccagcctt
gcccgcgccgcgtcgacctacgagcgcagccggcagaccacctggacgttcggcgagctg
ccggagaccgtcgaggtcgagcgcggcgggcacgtggtcaccgcgttcctggcgctggtc
gacgagggcgagacggtcggcgtccgggtggtgcccacccaggccgaggccacccggatg
agctggcggggcgcccgacggctcctggagctggtcgtcagctccccggtcaagcaggtg
gtcaagggcatcggaccacgctccaggctggcgctgcagttcaaccccgacggcgagatc
cccgacctggtcgccgactgcgtggacgccgccgccgacgagctgatcgcggccgccggt
ggcccgccgcgcaccgaggccgcgttcgccgcgctggtggccacggcccgcaccgagctg
cacacgctgaccagcgacgccgtccggcgggtggaggccgtgctgacgcaggcccgggag
accgccatcgccatcggcgccgcgccgggacggcgggtgcccgaggccgcgatcgccgac
ctgcgggcgcagatgggcggactgctgcaccgcggcttcgtcgccaccgccgggcgcagg
cggctgccggacctggtgaggtacctcaaggcgatggagctgcggctggacaagctgccg
gccaacgccgcccgcgacgcgctcctgatggcgcaggtcgaggcggtgaccaaggagtac
gagcagctgcgcgccgccgtcccggccaccggtgcgcccgacgacgcggtcatgcgggtg
cggtggatggtcgaggagcttcgggtcgggctgttcgcccagaccgtcggcacgccgcgg
ccggtctccgagcagcgcatctacaaggccatcgacgccgtgtcggtctga
DBGET
integrated database retrieval system
