Modestobacter sp. L9-4: KUM42_18240
Help
Entry
KUM42_18240 CDS
T10178
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mom Modestobacter sp. L9-4
Pathway
mom03030
DNA replication
mom03430
Mismatch repair
mom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KUM42_18240
03430 Mismatch repair
KUM42_18240
03440 Homologous recombination
KUM42_18240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mom03032
]
KUM42_18240
03400 DNA repair and recombination proteins [BR:
mom03400
]
KUM42_18240
Enzymes [BR:
mom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KUM42_18240
DNA replication proteins [BR:
mom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KUM42_18240
DNA repair and recombination proteins [BR:
mom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KUM42_18240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
TMV_coat
UVR
Motif
Other DBs
NCBI-ProteinID:
QXG75712
LinkDB
All DBs
Position
complement(3861401..3863308)
Genome browser
AA seq
635 aa
AA seq
DB search
MALPVHGAAADDVTAPGRPRYQQATIDDLGTALAGVTFVVVDLETTGGSPKDSAITEIGA
VKVRGGQVLGEFQTLVDPGHAIPPYISVLTGITTMMVAAAPRIGAVLPGFLEFARGAVLV
AHNAPFDLGFLRAACEENGVPWPAFGSVDTAVLARRLLTRDEVPNCKLGTLAPFFSATTQ
PTHRALDDARATVDVLHGLFERLGPLGITSLEELSGLTRQVDPRRRRKRHLAEHVPHGPG
VYVFRGPGDEPLYVGTSGDLRTRVRSYFSAGEQRSRMTEMITIAERIEALPCAHDLEAAV
RELRLIAEHKPRYNKRSRFPERALWVRLTDEPFPRLSVVRRERPGDGSFLGPFPDRRAAE
AAIAAVHESLPLRQCSGRLSLTVLGSACALAGMGRCGAPCTGAQSREEYASVAEVFTAAV
EHDPRGIIAPLLERVERLGVEGRYEDAAELRDRAAVLVRAVRRRQRLASLAAVAELVLAR
PDGEGGWQLSVVRNGRLVAAGVAERGRSVRGYLADLRSTAETTTAAEGELAASVEETELV
LRWMEKPGTRLVDVTGTLASRTPGTGDYSGFLALVEAGRAERDPFADNRSLGTRAQPDRV
STGRPAESGRRSRPRPDGRTPGRRGRSGTGLASPT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
gtggccctgccggtccacggcgcggcggccgacgacgtcaccgcccccggtcggccccgc
taccagcaggcgacgatcgacgacctcggcaccgcgttggccggcgtcaccttcgtcgtc
gtcgacctggagaccacgggcggctcccccaaggacagcgcgatcaccgagatcggcgcg
gtcaaggtccgcggtggtcaggtgctcggggagttccagaccctggtcgaccccggccac
gcgatcccgccctacatcagcgtgctcaccgggatcaccacgatgatggtggccgcggcg
ccacgcatcggggccgtgctccccggcttcctggagttcgcccggggtgcggtgctcgtc
gcccacaacgcccccttcgacctcgggttcctgcgcgccgcctgcgaggagaacggcgtg
ccgtggccggcgttcggctcggtcgacaccgccgtcctggcccggcggctgctcacccgc
gacgaggtgcccaactgcaagctgggcaccctcgcgcccttcttctccgccaccacccag
cccacccaccgggccctggacgacgcccgggccaccgtggacgtgctgcacgggctcttc
gagcgcctggggccgctgggcatcacctcgctggaggagctctcggggctgacccgtcag
gtcgacccccggcgccggcgcaagcgccacctggccgagcacgtgccgcacggccccggc
gtctacgtcttccgcggccccggcgacgagccgctgtacgtgggcacctccggcgacctc
cgcacccgggtgcgcagctacttctcggccggcgaacagcgcagccggatgaccgagatg
atcacgatcgccgagcggatcgaggcgctgccctgcgcccacgacctcgaggccgccgtc
cgggagctgcggttgatcgccgagcacaaaccccgctacaacaagcggtcccgcttcccc
gagcgcgccctgtgggtccggctgaccgatgagcccttcccgcgcctgtcggtggtccgc
cgggaacgccccggcgacggctccttcctcggcccgttccccgaccgccgggcggccgag
gccgcgatcgcggcggtgcacgagtcgctgccgctgcgccagtgcagcggccggctgtcg
ctcacggtgctcggcagcgcgtgcgcactcgccggcatggggcgctgcggggcgccgtgc
accggcgcgcagagccgtgaggagtacgcctcggtggccgaggtcttcaccgccgccgtc
gagcacgacccccggggcatcatcgcccccctcctggagcgggtcgaacgactcggcgtc
gagggccgctacgaggacgccgccgagctccgcgaccgggctgccgtcctggtgcgtgcg
gtccgccgccgccagcggctcgcctccctggccgcggtcgccgagctggtgctggcccgc
cctgacggcgagggcgggtggcagttgtcggtggtgcgcaacggccggctcgtggcggcc
ggggtggccgagcgcggacggtcggtccgcgggtacctggccgacctgcggtccaccgcg
gagaccaccacggcggccgagggagaactggccgcgtccgtcgaggagaccgagctcgtg
ctgcgctggatggagaagccggggacccggctggtcgacgtcaccggcaccctcgccagc
cgcacgccgggcaccggggactacagcgggttcctggccctggtcgaggccggtcgggcc
gagcgcgacccgttcgccgacaaccgctccctgggcacccgcgcccagcccgaccgggtg
tcgacgggccggcccgccgagtcgggccggcggtcccgtccccggcccgacggccgcacg
ccaggacgacgcggacggtcgggcaccgggctagcatccccgacgtga
DBGET
integrated database retrieval system
