Modestobacter sp. L9-4: KUM42_18680
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Entry
KUM42_18680 CDS
T10178
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mom Modestobacter sp. L9-4
Pathway
mom03030
DNA replication
mom03430
Mismatch repair
mom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KUM42_18680 (dnaE)
03430 Mismatch repair
KUM42_18680 (dnaE)
03440 Homologous recombination
KUM42_18680 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mom03032
]
KUM42_18680 (dnaE)
03400 DNA repair and recombination proteins [BR:
mom03400
]
KUM42_18680 (dnaE)
Enzymes [BR:
mom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KUM42_18680 (dnaE)
DNA replication proteins [BR:
mom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KUM42_18680 (dnaE)
DNA repair and recombination proteins [BR:
mom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KUM42_18680 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QXG78109
LinkDB
All DBs
Position
3960214..3963723
Genome browser
AA seq
1169 aa
AA seq
DB search
MLDGAAKLGEVTKAAAAEGMPALAMTDHGNVFGAYDFYKQANAAGVKPIIGMEGYYTPGS
RFDRAPYDFGDKLIDEEGDGGNNRGKAAYTHMTMLARTTEGMHNLFRISSMASLEGQYRK
PRFDRDLLEKHGKGLIATTGCPSGEVNMWLRAGKYDKAVAAAADFQDIFGKENFYAEVMD
HGLNIEKKTRPDLLKIAKDLGIPLLATNDLHYTHREDAQAHDALLCIQTGSRLNEPNRFK
FNGDGYYLKSSAEMRALFSELPEACDNTLVVAEQCEVQFTEGADLMPRFPLPEGEDETSW
FIKEVEAGLHKRYPAGIPDAVRKQADYETGIIAQMGFPGYFLVVADFINWAKDNGIRVGP
GRGSAAGSMAAYAMGITDLDPLAHGLFFERFLNPERVSMPDVDIDFDDRRRGEVIQYVSQ
KYGEERVSQIVTYGTIKAKAAIKDAARVLDRPYSVGDELTKLMPPGVMGKDIPLSGIFDP
KHDRYKEAAEFRARYESDPGAAEVVDQARKLEGLKRQWGVHAAGVIIGRYPLIDSIPIMR
READGAIITQFDYPTCETLGLLKMDFLGLRNLTVLDDALRNIVINGKDPVDLDEISKDLT
DPATYALLSRGDTLGVFQFDGGPMRSLLRLMRPDNFEDISAVGALYRPGPMGANSHTNYA
LRKNGQQEITPIHPELAEPLAEILGGTYGLIVYQEQVMSIAQKVAGYSLGKADLLRRAMG
KKKKSVLDAEYVGFEAGMKANGFSAAAVKTLWDILVPFADYAFNKAHSAAYGLISYWTAY
LKANYPAEYMAGLLTSVQDDKERRPVYLAECRRMGIKVLPPDVNQSSWDFTAVGGDIRFG
LASVRNVGHNVVASIVKAREEKGAFKDFADFMRKIDTVACNKKVIESLAKAGGFDSLGHS
RQGIAAIHAQAVDSAMSLKRREAEGQFDLFGSFGEDDGAGIGDPLSAALDIPIPTADWSK
SEKLVFERDMLGLYVSDHPLHGIEHVLTSHADTSLAEILSGGVEDGANVTIAGILTAVGP
RTNKQGAPWAIATLEDLEAGIEVLFFPKTWAEVSEKVVRDQVIAVKGRISRRDDTPSLFA
AEVTIPEITEGPRGPVLVSLPAARCTPPVVERLREVLGSHPGTTEVQLKLLNGGRETVLR
LDQGLRVRPSTALMGDIKALLGPTSVALL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacggggcggcgaagctgggtgaggtgacgaaggcggcggccgccgagggcatg
ccggcgctggcgatgaccgaccacggcaacgtgttcggcgcctacgacttctacaagcag
gcgaacgccgccggggtcaagccgatcatcggcatggagggctactacacgcccggctcg
cgcttcgaccgcgcaccgtacgacttcggcgacaagctcatcgacgaagagggcgacggc
ggcaacaaccgcggcaaggccgcctacacgcacatgacgatgctggcccgcaccaccgag
gggatgcacaacctcttccgcatctcctccatggccagcctcgagggccagtaccgcaag
ccgcgcttcgaccgcgacctgctggagaagcacggcaagggcctgatcgccaccaccggc
tgcccgtcgggcgaggtgaacatgtggctgcgcgccggcaagtacgacaaggccgtcgcc
gccgcggccgacttccaggacatcttcggcaaggagaacttctacgccgaggtcatggac
cacggcctgaacatcgagaagaagacccggccggacctgctcaagatcgccaaggacctc
ggcatcccgctgctggccaccaacgacctgcactacacccaccgtgaggacgcccaggcc
catgatgcgctgctgtgcatccagaccgggtcgcggctcaacgagcccaaccgcttcaag
ttcaacggcgacggctactacctgaagtcctcggccgagatgcgcgcgctgttcagcgag
ctccccgaggcctgcgacaacaccctggtcgtcgccgagcagtgcgaggtccagttcacc
gagggtgcggacctcatgccgcgcttcccgctgcccgagggggaggacgagacctcctgg
ttcatcaaggaggtcgaggccgggctgcacaagcggtaccccgccggcatcccggacgcc
gtgcgcaagcaggccgactacgagaccgggatcatcgcccagatgggcttcccggggtac
ttcctcgtggtcgcggacttcatcaactgggccaaggacaacggcatccgggtcggcccc
ggccgtggctcggccgccggctccatggccgcctacgccatgggcatcaccgacctggac
ccgctggcgcacgggctgttcttcgagcggttcctcaaccccgagcgcgtgtccatgccc
gacgtcgacatcgacttcgacgaccggcgccgcggcgaggtcatccagtacgtctcgcag
aagtacggcgaggagcgggtcagccagatcgtcacctacggcacgatcaaggccaaggcc
gcgatcaaggacgccgcccgggtgctcgaccggccctactccgtcggtgacgagctgacc
aagctcatgcccccgggcgtcatgggcaaggacatcccgctgtcggggatcttcgacccc
aagcacgaccgctacaaggaggccgcggagttccgcgcccgctacgagtccgaccccggt
gccgccgaggtcgtcgaccaggcccgcaagctcgagggcctgaagcgccagtggggcgtg
cacgccgccggcgtcatcatcggccgctacccgctgatcgacagcatcccgatcatgcgg
cgcgaggccgacggcgcgatcatcacgcagttcgactacccgacctgcgagacgctcggc
ctgctcaagatggacttcctgggcctgcgcaacctcaccgtcctcgacgacgcgctgcgc
aacatcgtgatcaacggcaaggacccggtcgacctcgacgagatcagcaaggacctcacc
gacccggccacgtacgccctgctctcccgcggcgacaccctgggcgtcttccagttcgac
ggcggcccgatgcggtcgctgctgcggctgatgcgcccggacaacttcgaggacatctcc
gccgtcggtgccctctaccggcccggcccgatgggtgccaactcgcacaccaactacgcg
ctgcgcaagaacggccagcaggagatcaccccgatccacccggagctggccgagccgctc
gcggagatcctgggcggcacctacggcctgatcgtgtaccaggagcaggtcatgtcgatc
gcgcagaaggtcgccgggtactccctcggcaaggccgacctgctgcgccgcgcgatgggc
aagaagaagaagtcggtcctggacgccgagtacgtcggcttcgaggccggcatgaaggcc
aacggcttctccgccgcggcggtcaagacgctctgggacatcctggtgcccttcgccgac
tacgcgttcaacaaggcgcactcggcggcctacggcctgatctcctactggacggcctac
ctcaaggccaactacccggccgagtacatggccgggctgctcaccagcgtccaggacgac
aaggaacggcggccggtctacctggccgagtgccgccggatgggcatcaaggtcctcccg
cccgacgtcaaccagtcctcctgggacttcaccgccgtcggtggcgacatccgcttcggc
ctggcctcggtgcgcaacgtcgggcacaacgtcgtcgcctcgatcgtcaaggcgcgcgag
gagaagggcgcgttcaaggacttcgccgacttcatgcgcaagatcgacacggtggcctgc
aacaagaaggtcatcgagtcgctggccaaggccggtggcttcgactccctgggccactcg
cggcagggcatcgcagcgatccacgcgcaggccgtcgactcggcgatgagcctcaagcgc
cgggaggccgagggccagttcgacctcttcggcagcttcggtgaggacgacggagcgggc
atcggtgacccgctcagcgccgcgctggacatcccgatccccaccgcggactggtcgaag
tcggagaagctggtcttcgagcgcgacatgctcggcctctacgtctccgaccacccgctg
cacggcatcgagcacgtcctcacctcgcacgccgacacctcgctggccgagatcctgtcc
ggcggcgtggaggacggcgccaacgtgaccatcgccggcatcctcaccgcggtcgggccg
cgcaccaacaagcagggcgcgccgtgggcgatcgccacgctcgaggacctcgaggccggc
atcgaggtgctgttcttccccaagacgtgggccgaggtgtcggagaaggtcgtccgcgac
caggtcatcgcggtcaagggccggatcagccgccgcgacgacaccccgtcgctgttcgcc
gccgaggtcaccatcccggagatcaccgagggcccccgcggcccggtgctggtcagcctg
ccggcggcacggtgcacgccgccggtggtggagcggctgcgcgaggtgctgggcagccac
ccgggcacgaccgaggtgcagctcaagctgctcaacggcggccgggagacggtgctgcgg
ctggaccaggggctgcgggtgcggccgagcacggcgctgatgggcgacatcaaggcgctg
ctgggccccaccagcgtcgccctgctgtga
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integrated database retrieval system
