Modestobacter sp. L9-4: KUM42_19125
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Entry
KUM42_19125 CDS
T10178
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mom Modestobacter sp. L9-4
Pathway
mom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KUM42_19125 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mom03400
]
KUM42_19125 (ruvB)
Enzymes [BR:
mom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KUM42_19125 (ruvB)
DNA repair and recombination proteins [BR:
mom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KUM42_19125 (ruvB)
RecFOR pathway proteins
KUM42_19125 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_16
AAA_5
TIP49
Mg_chelatase
Resolvase
IstB_IS21
nSTAND3
AAA_14
Sigma54_activ_2
Zeta_toxin
RNA_helicase
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QXG75854
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All DBs
Position
4046186..4047322
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AA seq
378 aa
AA seq
DB search
MSAFDRGLSAADAGTGRYTAPDWDDAVDPRAGDEERVVESALRPNSLADFIGQPKVARQL
DLVLEGAKRRGRPPDHVLLSGPPGLGKTSLALIIGSELGTGVKITSGPAIERSGDLAAML
SNLAPGDVLFIDEIHRIARPAEELLYMAMEDFRVDVVVGKGPGATAIPLEINPFTLVGAT
TRAGLLTGPLRDRFGFVGQMEFYETADLQKVLARSAGLLGVELTADGSAEIAGRSRGTPR
IANRLLRRVRDFAEVKADGRVTLEVARAALTLYDVDDLGLDRLDRSVLDALVTKFGGGPV
GVSTLAVAVGEEPHTVEEVCEPFLVRAGLLARTPRGRVATEAAFRHLGHAVPRGGVPLSG
GTGDAPSDGSSAATLFDA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccttcgaccgcgggctgtccgccgccgacgcgggcaccggccgctacaccgca
cccgactgggacgacgccgtcgacccccgggccggtgacgaggagcgggtcgtcgagtcc
gcgctgcggccgaactcgctggccgacttcatcggccagccgaaggtcgcccgccagctg
gacctggtgctcgagggcgccaagcgccgcggccggccgccggaccacgtgctgctgtcc
ggcccgcccgggctgggcaagaccagcctggcgctgatcatcggctccgagctgggcacc
ggcgtgaagatcaccagcggcccggcgatcgagcgctccggcgacctcgccgcgatgctg
tcgaacctggcccccggtgacgtcctgttcatcgacgagatccaccggatcgcccggccg
gccgaagagctgctgtacatggcgatggaggacttccgcgtcgacgtcgtggtgggcaag
ggccccggtgccacggcgatcccgctggagatcaacccgttcaccctcgtcggtgccacc
acccgcgccgggctgctcaccggcccgctgcgcgaccggttcggcttcgtcgggcagatg
gagttctacgagaccgccgacctgcagaaggtgctcgcgcgcagcgccggcctgctgggc
gtcgagctgaccgccgacggctcggccgagatcgccggccggtcccgcggcacgccccgc
atcgccaaccggctgctgcgccgggtgcgcgacttcgccgaggtcaaggccgacggccgg
gtcaccctggaggtggcccgggccgcgctgaccctctacgacgtcgacgacctgggcctg
gaccggctggaccggtcggtgctcgacgccctggtgaccaagttcggcggcgggccggtc
ggcgtctcgacgctggcggtcgccgtgggggaggagccgcacaccgtcgaggaggtgtgc
gagccgttcctggtccgtgccgggctgctcgcccgcacccctcgcgggcgggtggccacc
gaggccgcgttccgccacctggggcacgccgtcccgcgcggcggggtgccgctcagcggg
ggcacaggtgacgctccctcggacgggtcttccgctgccacgctcttcgacgcctag
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