Pontivivens nitratireducens: G8E03_06525
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Entry
G8E03_06525 CDS
T06480
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mon
Pontivivens nitratireducens
Pathway
mon03030
DNA replication
mon03430
Mismatch repair
mon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G8E03_06525 (dnaE)
03430 Mismatch repair
G8E03_06525 (dnaE)
03440 Homologous recombination
G8E03_06525 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mon03032
]
G8E03_06525 (dnaE)
03400 DNA repair and recombination proteins [BR:
mon03400
]
G8E03_06525 (dnaE)
Enzymes [BR:
mon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G8E03_06525 (dnaE)
DNA replication proteins [BR:
mon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G8E03_06525 (dnaE)
DNA repair and recombination proteins [BR:
mon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G8E03_06525 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Sulfotransfer_3
DUF7398
Motif
Other DBs
NCBI-ProteinID:
QIK40455
UniProt:
A0A6G7VKR8
LinkDB
All DBs
Position
1337047..1340574
Genome browser
AA seq
1175 aa
AA seq
DB search
MTTSPRFIHLRVHSAYSLLEGALQVKKLPEMAKAAGMPALAVTDTCNNFAALEFSEVAAK
AGLHPIIGTQFPLAYAGPPRPGEKPVEPRSIVLLAQNDTGWENLMQLNSCAYLDSGDLLP
HLTLEELARHSDGLICLTGGALGPLGQLIRDGHAPSAATLADQLVDMFPDRLYIELQRHP
VGDATRTQEESASEPGLVQLAYAKNLPLVATNDVHFPVREMYEAHDALICIADGNYVDQA
EPRRRLTEEHYFKSADEMAALFADLPEALENTVEIAHRCAFRVTTRDPILPKFADDEVDE
LRRQANEGLQNRLAVIPHAVPVEEYQKRLDFELEIIEGMGFPGYFLIVADFIKWAKDHDI
PVGPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIR
YVQQKYGRDKVGQIITFGALLSKAAVRDVGRVLQMPYMQVDRLSKLIPVEGVKPVSIQQA
LVDEPRLKEEARQEEVVNRLLTIGSALEGLLRNASTHAAGVVIGDRPLDRLVPLFKDPRS
DMPATQFNMKWVEQAGLVKFDFLGLKTLTVIQNALDLLKGQGTPLMDPPEGDDNASKARR
AALEINPYDISAIPIDDPLSYELYASAQTVAVFQVESSGMRDALRQMKPTCIEDIIALVA
LYRPGPMENIPTFCDVKNGRKERALLHPTVDHILDETQGIIVYQEQVMQIAQDMAGYTLG
GADMLRRAMGKKIQEAMDAERPKFLAGAAENNVDQAKAQEVWDLLDKFANYGFNKSHAAA
YAVVSYQTAWLKANHPVEFMAGVMNCDIHLTDKLSIYKQEIDRLKIGLIPPCVNRAEATF
TVKDGQVVYALGGLKNVGVEAMRLITDARRADGADKPFLDLFDFARRVDLKRVGKRPLEM
LARAGAFDLLDANRHKVFASLDKLVAYSAATHEEKNSSQGGLFGDAGEDLPAPRLPMPED
WLPTERLAQEHQAIGFYLSGHPLDDYMPPLRRKRVMTLADITAKAKGGPVAAKLAGTVSA
KQVRKSARGNRFAFVSCSDPTGLYEVTVFGDTLEQAGDLFDVGQNIVMSVEATMEGDSLK
LLARSVTSAEDIVAEAGTAGLKIYLNDQDALGSVAARLADSATGPRRGRGPVNLILQHPD
LPGDVEIRLKDEYRVTPQIKAAIKSAQGVVYVEEF
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatccccccgattcatccacctgcgcgtccactcggcctattcgctgcttgaa
ggtgcgttgcaggtcaagaaactgcccgagatggccaaggccgcaggtatgcccgcgctg
gccgtcaccgatacctgtaacaatttcgccgcgctggagttttccgaggtcgcggcaaag
gccggcctgcatccgatcatcggcacgcagtttccgctggcctatgccggcccgccccga
ccgggtgaaaagccggtggagcctcgctcgatcgtattgctggcgcagaacgacacgggc
tgggaaaacctgatgcagctcaattcatgcgcctatctggacagtggcgatctgctgccg
cacctgacgctggaggagttggcccgacattcggacgggctgatctgcctgaccggcggt
gcactgggcccgctggggcaactgatccgcgacggtcacgcacccagcgccgcgacgctt
gccgatcaactggtcgacatgttccccgaccggctgtacatcgaactgcagcgccacccc
gtaggagacgcgacccggacgcaggaggaatccgccagcgagcccggtctggtgcaactc
gcctacgccaagaacctgccgctggtcgccaccaacgacgtgcacttccctgtcagagag
atgtacgaggcgcacgacgctctgatctgtatcgccgatggcaactatgtcgatcaggcg
gagccgcgccgccgtctgaccgaggaacattatttcaagagcgcggacgagatggccgcc
ctgttcgcggatctgcccgaggcgctggaaaacaccgtcgagatcgcccaccgctgtgcc
ttccgtgtgacgacacgcgatccgattctgccgaaattcgccgatgacgaggtggacgaa
ctgcgccgtcaggcgaacgagggcctgcaaaaccgcctcgccgtgattccccacgccgtc
ccggtagaggaataccagaaacgtctcgatttcgagttggagattatcgaggggatgggc
ttccccggttatttcctgatcgttgcggacttcatcaaatgggccaaggatcacgacatt
cccgtcggtccgggccggggttcgggcgcgggcagtctggtcgcctacgcgctgaccatc
accgatctggatcccttgcgctattccctgctgttcgagcggttcctgaatcccgaacgg
gtctccatgcccgatttcgacatcgatttctgcatggaccggcgtgaggaggtcatccgc
tacgtccagcagaaatacgggcgcgacaaggtcgggcagatcatcacctttggcgcgttg
ctgtccaaggcggccgtgcgcgacgtgggccgtgtcttgcaaatgccctacatgcaagtg
gatcgactgtccaagctgatcccggttgagggggtcaagcccgtctcgatccagcaggcg
ctggtggatgagccgcggctgaaggaagaggccaggcaggaggaggtcgtcaaccgcctg
ctgaccatcggttcggcgctggaggggctgttgcgcaacgcatccacccacgcggcgggc
gtggtgatcggggaccgtccgctggaccggctggtgccgctgttcaaggatccccgctcc
gacatgccggccacccagttcaacatgaaatgggtcgaacaggccgggctggtgaaattc
gacttcctcggcctgaagaccttgacggtgatccagaacgcgcttgatctgctcaagggg
cagggcaccccgttgatggacccgcccgagggcgacgacaacgccagcaaggcccggcgc
gcggcgctcgaaatcaatccctacgacatctccgccattccgatcgacgatccgctcagc
tacgaactctacgcctcggcgcagacggtggcggtgtttcaggtggaaagctcaggcatg
cgcgacgctctgcgccagatgaagcccacctgcatcgaggatatcatcgcgctggtcgcc
ctctaccgccccggcccgatggagaatatcccgaccttctgcgacgtgaagaacgggcgc
aaggagcgcgccctgctgcaccccaccgtggatcatatcctggatgagacgcagggcatc
atcgtctatcaggaacaggtgatgcagatcgcgcaggacatggccggctatacgctgggc
ggtgccgacatgctgcgccgcgcgatgggcaagaagattcaggaggcgatggacgccgag
cgcccgaaattcctcgccggtgctgccgaaaacaacgtggatcaggccaaggcgcaggaa
gtctgggacctgctggacaagttcgctaattacggcttcaacaaatcccacgccgccgcc
tatgccgtggtcagctaccagaccgcgtggctgaaggcgaaccatccggtcgaattcatg
gccggtgtgatgaattgcgacatccacctgaccgataagctcagcatctacaagcaggag
atcgaccgcctgaaaatcggtctgatcccgccttgcgtcaaccgggccgaggcgacgttc
acggtcaaggacgggcaggtcgtctacgccctgggcggtctgaaaaacgtcggggtcgag
gcgatgcgcctgataacggatgcgcggcgggcggacggcgcggacaagcccttcctcgat
ctgttcgacttcgcccgccgggtcgatctgaaacgggtgggcaagcgcccgctggaaatg
ctggcccgtgcgggcgcgttcgacctgctggacgcgaaccggcacaaggtcttcgccagt
ctggacaagctggtggcttactccgccgccacgcatgaggaaaagaactccagtcagggt
ggtctgttcggtgacgcgggtgaggatttgcccgcgccgcgcctgcccatgcccgaggat
tggctgccgacggaacgcttggcgcaggagcatcaggccatcggcttctacctgtcaggc
caccccctcgacgattatatgccgcccctgcggcgcaagcgtgtgatgactttggcggac
atcacggccaaggcaaagggcgggcccgttgctgcgaaactggcgggcaccgtttcggca
aagcaggtgcgcaaatcggcgcggggcaaccgcttcgccttcgtttcctgctcggatccg
acgggcctctacgaggtgaccgtgttcggcgacacgctggaacaggcgggcgatctgttc
gacgtgggccagaacatcgtgatgagcgttgaggccacgatggagggggacagcctgaaa
ctgctcgcgcgtagtgtcacctcagccgaggatatcgtggcggaggccggaaccgccggt
ctgaagatctatctaaacgatcaggacgccctcggctccgtcgccgcgcgtctggccgac
agcgccacgggcccgcgccggggcagggggccggtcaacctgattctgcaacacccggat
ttgccgggcgatgtggagatcaggctcaaggacgaataccgcgtcacgccgcagatcaag
gcggcaatcaaatcggcgcagggcgtggtctatgtcgaggaattctag
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