Pontivivens nitratireducens: G8E03_08690
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Entry
G8E03_08690 CDS
T06480
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mon
Pontivivens nitratireducens
Pathway
mon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G8E03_08690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mon03019
]
G8E03_08690
Enzymes [BR:
mon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G8E03_08690
Messenger RNA biogenesis [BR:
mon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G8E03_08690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
HEM4
ERCC3_RAD25_C
ACTL7A_N
Motif
Other DBs
NCBI-ProteinID:
QIK40832
UniProt:
A0A6G7VLM3
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All DBs
Position
1753288..1754538
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AA seq
416 aa
AA seq
DB search
MTDKTFADFDLAQPIKDALARAKFEKPTAIQAQAIQPQLDGRDILGLAQTGTGKTAAFAL
PILHHILQMPGRAAPGTARALILAPTRELAVQILDEFRRFAGGARVSTCLVLGGVSRNVQ
IRNLGRGVDVLVATPGRLLDLVDDRKVRLDEVRFVVLDEADRMLDMGFVQPVRRIVSMLH
PRRQSAMFSATMPSEVSGLAGSFLNNPVRVEVAPQSTVVTRIEQTAELMDGTAKRARLAQ
LMNAEGMERAIVFARTKRGADRVAQNLEKDGIKAEAIHGNKAQNARQRALNNFRHGTVKV
LVATDIAARGIDVPGISHVVNYDLPDEPENYVHRIGRTARNGADGVAITLCAPDEVKKMR
AVEKITGERLLPGGTPEGESKPRSNRRGGGGGKPGGAPKSGRPNRRRRGPSRANAA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagacttttgccgatttcgacctggcccagccgatcaaggatgcgctggcg
cgtgcgaaattcgaaaaacccactgcaattcaggcgcaggcgatccagccacagctggac
ggccgcgacattctgggtctggcccagaccggcaccggcaagacggcggccttcgctctg
ccgatcctgcatcacatcctgcaaatgccgggacgtgccgcaccgggcacggcgcgcgcg
ctgatcctggccccgacgcgtgagctggcggtgcagatcctcgacgagttccgccggttc
gcgggcggcgcgcgcgtgtccacctgtctcgttctgggcggcgtttcgcgcaacgtgcag
atccgcaatctgggccggggcgtggacgttctggtcgcgacgccgggccggttgctcgat
ctggtcgatgaccgcaaggtgcggttggacgaggtccgcttcgtggttctggatgaggct
gaccggatgctcgacatgggcttcgtacagccggtgcgccgcatcgtgtccatgctgcat
ccccgccgtcagtccgcgatgttttccgcaacgatgccgtccgaggtttcggggctggcg
ggcagcttcctcaacaatcctgtccgggtcgaggtcgcgccgcaatccaccgtggtgacg
cggatcgagcagaccgccgaactgatggacggcaccgccaagcgggcgcgtctggcccag
ttgatgaacgcggagggaatggagcgtgccatcgtcttcgcccgcaccaagcgcggggcg
gatcgtgttgcgcagaaccttgagaaagacggcatcaaggccgaggcgatccacggcaac
aaggcgcagaacgcgcgccaacgtgcgctcaacaactttcgccacggcacggtcaaggtg
ctggtcgcgactgatattgccgcacggggcatcgacgttccggggatcagccatgtcgtg
aactacgacctgccggatgagcctgagaactacgtacaccgcatcgggcggacggcgcgc
aacggcgcggatggcgtggcaattaccttgtgcgcccccgatgaggtcaagaagatgcgc
gcggtcgagaagatcaccggtgagcgtctgctgcccggcggcacacccgagggggagagc
aagccgcgcagcaaccgtcgcggtggcggtggcggcaagcccggcggcgcgcccaaatcc
ggccgccccaaccggcggcgtcgcggaccctcgcgcgccaacgctgcgtga
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