Pontivivens nitratireducens: G8E03_10550
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Entry
G8E03_10550 CDS
T06480
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mon
Pontivivens nitratireducens
Brite
KEGG Orthology (KO) [BR:
mon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mon03032
]
G8E03_10550
03400 DNA repair and recombination proteins [BR:
mon03400
]
G8E03_10550
Enzymes [BR:
mon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G8E03_10550
DNA replication proteins [BR:
mon03032
]
Prokaryotic type
DNA Topoisomerases
G8E03_10550
DNA repair and recombination proteins [BR:
mon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G8E03_10550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF2207_C
Motif
Other DBs
NCBI-ProteinID:
QIK41169
UniProt:
A0A6G7VM99
LinkDB
All DBs
Position
complement(2126839..2128032)
Genome browser
AA seq
397 aa
AA seq
DB search
MAVCAARMLEDAGRLLKHRGGTARRIGYIREVGWRTQVLRIQGRGDQGQDNECNKSRSER
TGCPARLSHMELQYVSDREPGITRKRAGRGFAYYDGGQLIRDRVEKQRFAALAIPPAYDD
VWICRWENGHLQATGRDARARKQYRYHPDWTTARDADKFADLTDFAKDLPNLRSRVGSDM
RKRTLGRDRVLATVVHLLDKSHIRIGNRAYTHDNGTVGLTTLRDEHVEISGERLQFDFIG
KSSKRRRLSLRDRYMATTVRKLSDLPGQMLFQWQDEDGLHEVRSDHVNDWLRQTTGSEWT
AKIFRTWAGTMICADALARSDLEGEKAVIEAVDSTAAALGNTRAVARRSYIHPEIIIAYE
EGRWPGRRHLSRDPIGRARLSRTERAVVKLLNDAQSR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttgcgcagcgcggatgctggaagacgcgggccgcctcctcaaacatcgcggt
ggaacggctcgccggatcggctatatccgcgaagtcggctggcgcacgcaggttctgcgc
attcaggggcgtggcgatcaaggtcaggataacgagtgtaacaagtcccgatcggaacgc
accggatgtccggcgcgtctatcccacatggaactgcaatatgtatctgatcgggaaccg
ggaattacgcgcaaacgcgcgggcaggggctttgcgtattatgatggtgggcaactgatc
cgcgaccgtgttgaaaagcagcgatttgccgctctggccattccgcctgcatatgacgac
gtgtggatctgtcggtgggaaaacggccatcttcaggccactgggcgtgatgcgcgggcg
cgcaagcaataccgataccatcccgactggaccacggcacgcgacgcggacaaattcgcg
gatctgaccgatttcgccaaggacctgccgaatttgcgcagccgggtgggcagtgacatg
cgcaagcggaccttgggccgtgatcgcgttctggcaacggttgttcatctgttggacaag
agccatatccgcatcggcaatcgcgcctatacgcatgataacggcactgtcggcttgacc
accctgcgcgatgaacatgtcgagatcagtggtgagcgactgcaattcgacttcatcggc
aaatcctccaaacgtcgccggttgagcctgcgtgacagatacatggcgaccacagtgaga
aagctgtctgacctgcccggtcagatgctgttccagtggcaggatgaggacggcttgcac
gaggtccgttccgatcacgtcaacgactggctgcgccagacgaccggatcggaatggaca
gccaagatattccgaacctgggccggtacgatgatctgcgccgacgcattggcgaggagc
gatctggagggcgaaaaagccgtgatcgaggccgtggactcgacggcggccgccttgggc
aacacccgggccgtggcgcgacgcagctatatccaccccgagatcatcatcgcatacgag
gaaggacgctggcccggtcgtcgccatctgtcgcgcgatccgatcggacgggcgcgatta
agcaggacggaacgggccgtggtcaaattgctcaacgatgcgcaatcgcgctaa
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