Microbacterium oleivorans: BWL13_00185
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Entry
BWL13_00185 CDS
T05832
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
moo
Microbacterium oleivorans
Pathway
moo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWL13_00185 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moo03019
]
BWL13_00185 (recQ_1)
03400 DNA repair and recombination proteins [BR:
moo03400
]
BWL13_00185 (recQ_1)
Enzymes [BR:
moo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BWL13_00185 (recQ_1)
Messenger RNA biogenesis [BR:
moo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BWL13_00185 (recQ_1)
DNA repair and recombination proteins [BR:
moo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BWL13_00185 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
QueC
Motif
Other DBs
NCBI-ProteinID:
AZS42650
LinkDB
All DBs
Position
179252..181315
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AA seq
687 aa
AA seq
DB search
MSDGGWQNDPYADLVWDPDDVAPPEEYDSPPPPDPRYDDYAASVARASRAEPTPPAQVRP
ARAQPARPAAPPASVLQLERRDHVGDDPVKVLTEVFGYTAFRGDQGDIVSHVIAGGDAVV
LMPTGGGKSITYQVPALVRPGTGLVVSPLIALMHDQVEALIANGVRAAFLNSTQSPAERA
GVEQALLDGELDLIYVAPERLSVPATTALLQRAQLSVIAIDEAHCVSQWGHDFRPDYLAL
GDLAERFPGVPRMALTATATRATHTELTERLHLPDARHFVASFDRPNIQYRIEPKVDMRR
QLVQFVRSQPEGSAGIVYALSRKSVEQTAEYLRTQGLDALAYHAGLDASIRARHQSRFLR
EDGVVMVATIAFGMGIDKPDVRFVAHIDLPKSVEGYYQETGRAGRDGEPAVAWMAYGLGD
VVQQRRLIDQSPGDRTYKMRMGQHLDAMLALCETVSCRRQNLLNYFGQSSDACGNCDTCL
TKPDTWDGLIAAQKLLSTIVRLQRERNQAFGAGHLIDIVRGASTERIRQQGHDKLSTYGV
GNDLSEQDWRSVVRQLLARGILVAQGEYGVLAVGDAGTPVLRGEEPVPLRRDVLGRTGGG
SSRAKKQSAADALPEGDRDLFEALRAWRAEQAKEQGVPAYIVFGDATLRALAEHRPRSVS
DLDGITGIGAKKREAYGEAVVAVIANA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacggcggatggcagaacgacccctacgccgatctcgtgtgggatcccgacgat
gtcgcgccgccggaggagtacgactcgccgccgccgccagacccgcggtacgacgactac
gccgcatccgtcgcacgcgcctcgcgcgccgagcccacgccgcccgcacaagtgcgcccc
gcccgcgctcagcccgcccgccccgcggcaccgccggcatccgtcctgcaactcgaacga
cgtgatcacgtcggagacgatccggtcaaggtcctgaccgaggtcttcggctacaccgcc
ttccgcggcgatcagggcgacatcgtctcgcacgtcatcgccggcggtgacgcggtcgtc
ctcatgcccaccggtggcggcaagtcgatcacctaccaggtgcctgcgctcgtgcgtccc
ggcacgggactcgtcgtcagccccctcatcgcgctgatgcacgaccaggtcgaggcgctc
atcgccaacggcgtccgtgcggctttcctgaactccacgcagagtcccgccgagcgcgcc
ggtgtcgagcaggcgctcctcgacggcgaactcgacctcatctacgtcgcgcccgagcgt
ctctccgttcccgcgaccaccgcgctcctgcagcgcgcgcagctcagcgtgatcgcgatc
gacgaggcgcactgcgtgtcgcagtggggtcacgactttcgccccgactacctcgcgctc
ggcgacctcgccgaacggttcccgggcgtcccgcgcatggcgctcacggccaccgcgacc
cgcgcgacgcacaccgagctcaccgagcgcctgcacctgcccgacgcgcgccacttcgtc
gcgagcttcgaccggccgaatatccagtaccggatcgagcccaaggtcgacatgcgccgc
cagctcgtgcagttcgtccgctcccagcccgagggctccgccggcatcgtgtacgcgctc
agccgcaagtcggtcgagcagacggcggagtacctgcggacgcagggtctcgacgccctg
gcctatcacgccgggttggatgcctcgatacgcgcccggcaccagtcgcgcttccttcgc
gaagacggtgtcgtcatggtcgccacgatcgcgttcggcatgggcatcgacaagcccgac
gtccgtttcgtcgcgcacatcgacctgccgaagtccgtcgagggctactaccaggagacc
ggtagagccggtcgtgacggcgagcccgcggtcgcgtggatggcctacggcctcggcgat
gtcgtgcagcagcgacgcctcatcgaccagtcgcccggtgaccgcacctacaagatgcgc
atgggccagcacctcgacgcgatgctcgccctctgcgagacagtctcgtgccgtcgtcag
aaccttctgaactacttcgggcagtcctcggatgcctgtggcaactgcgacacatgcctc
acgaagcccgacacctgggacggtctcatcgccgctcagaagctcctctcaacgatcgtg
cgactgcagcgcgagcggaaccaggcgttcggcgccgggcatctcatcgacatcgtccgc
ggcgcctcgaccgagcggatccgccagcagggccacgacaagctctcgacctacggggtc
gggaacgatctgtccgagcaggactggcgctccgtggtccggcagttgctggcccgcggc
atcctcgtcgcgcagggggagtacggcgttctcgccgtcggcgacgcgggcacgccggtg
ctccgcggcgaggagccggtgccgctgcgccgcgatgtgctgggccgcaccggtggtgga
tcgagtcgcgcgaagaagcagtcggccgccgacgcgctgcccgagggcgaccgcgacctc
ttcgaggcgctccgcgcgtggcgtgccgagcaggcgaaagagcagggagttcccgcctac
atcgtcttcggcgacgcgaccctgcgcgccctcgccgagcaccggccgcggtcggtgtcc
gacctcgatggcatcaccggcatcggcgccaagaagcgcgaggcgtacggcgaggccgtc
gtcgccgtcatcgcgaacgcctga
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