Mesorhizobium opportunistum: Mesop_0404
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Entry
Mesop_0404 CDS
T01542
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mop
Mesorhizobium opportunistum
Brite
KEGG Orthology (KO) [BR:
mop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mop03400
]
Mesop_0404
Enzymes [BR:
mop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mesop_0404
DNA repair and recombination proteins [BR:
mop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Mesop_0404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AEH84899
UniProt:
F7Y1S1
LinkDB
All DBs
Position
442584..445718
Genome browser
AA seq
1044 aa
AA seq
DB search
MSGPSRVFSIPSGAPFLPTLAEALLAGRLVPGFRFDGDPLALADVTIYVPTRRAARALRG
VFVDSLKARGGGGSAILPVIRPLGEFDEDEAAFEAEPSAAIDLAPPIGATERLLLLTPLV
RAWKRRLPAHVAKLFAEEIVIPASTADAIWLARDLAGLMDEIETEGTDWAKLEGLVTGNL
AGWWQVTLEFLGIVTDAWPKFLEEQDRSNPAAHRSALIRAEAARLRRNPPAGPVIAAGST
GSIPATAELLAAIARLPGGAIVLPGLDRTLDEASFQALVAPGARPAVLGHPQYGLARLIG
KIGVLRGDVEEIGVAEPRLALRAALVGEALRPAETTELWAETRNAFSAPDIAAAFADVTL
LEAASERDEAVAIAVALKRAVEEPGQRAALVTGDRALARRVSVELKRFGVVADDSGGTPL
ANSPAASLLRLALEAVFRPGDPVGLLSLLKHPLLCLGLGRADVRHAAELVELVALRGGTG
RPDIASLPDLFETRLTGFDEGSRPPFWVARLTVRAIESARDLLERLNRALAPLAAFRGQA
TADLAALVEASVVALEVLGRAADGGLGELYAGDAGEKLAELLRGLVAAPATLSFAANEWP
DVMDALIAPETVKPAQGTDRNIAIWGALEARLQDVDTLVIGGLNEGVWPRKPESDRFMSR
LMKTGIDLEPPERRIGLAAHDFQMAMGAGKVLLARSARSGDAPAVPSRWLQRLLTFIGND
QAATLRRRGDELLAWARALDTGPKQDFAPRPQPKPPLSVRPTHFSVTEIETLRRDPYAVY
ARRILGLMPLEPLIRDPGAAERGTLFHAILHLFSSSVADPRAPDALAGLIAAGRACFAEA
ALPPDVEAVWWPRFEKLAANIVEWERTRADAVIRRHAEERAGKTVVGQSGVTLSGYADRV
DLLAGGMADILDYKTGSSPSKAQAHTLLAPQLALEGALLRRGAFKDLGACEPSQLAFIRL
KPNGEVFEESILEHNRQPRTASDLAEEAWARLEKLLIHYADPKTGYLSRALPFREGETDG
DYDHLARVLEWSAGGDAGDEGGEA
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcccaagccgcgttttctccattccctccggagcgccgtttctgccgacgctg
gccgaggcgctgcttgccggccgactggttccaggctttcgcttcgacggcgatccgctc
gctttggccgacgtcaccatctatgtgccgacgcgccgcgcggcgcgggccttgcgcggc
gtcttcgtcgacagcctgaaggcgcgtggcggcggcggttcggcgatcctgcccgtcatc
cggccgctcggggaattcgacgaggacgaagccgctttcgaggcagagccgtcggcggca
atcgatcttgcgccaccgatcggggcgaccgaacgcctgttgctgctgacgccgctggtg
cgcgcctggaaacgccggctgccggcccatgtggccaaactcttcgccgaggagatcgtc
atcccggcctcgaccgccgacgcgatctggctggcgcgcgatctcgcggggctgatggac
gagatcgagacggaaggcacggactgggcgaagcttgaaggcctggtgaccggcaatctt
gccggatggtggcaggtgacgcttgagttcctcggcatcgtcaccgatgcctggccgaaa
ttcctcgaagagcaagaccggtccaatccggccgcgcatcgcagcgcgctgattagggct
gaagccgcgcggctgcggcgcaatccgcccgccgggccggtgatcgccgccgggtcgacc
ggctcgatacccgcgacggctgaactgcttgccgcgattgcccgcttgcccggcggcgcc
atcgtgctgcccgggctcgaccggactttggacgaagcgtccttccaggcgcttgtcgca
cccggcgcgcggccggccgtgctcggccatccgcaatacggcctggccaggctgatcggc
aagatcggcgtgctgcgcggcgatgtcgaggagatcggcgtggccgaaccccggctggcg
ctccgcgcggcccttgtcggcgaggcgctgcggccggccgaaaccaccgaattgtgggcc
gagacgcgtaacgcattttccgcgccggacattgccgctgccttcgccgacgtgacgctg
ctcgaagccgccagcgagcgcgacgaggccgtcgccatcgccgtcgcgctcaagcgagcg
gtcgaagaaccgggccaaagggctgctctcgtcaccggcgaccgtgcgctggcgcgacgc
gtctcggtcgaactcaagcgcttcggcgtcgtcgccgatgattccggcggcacgccgctc
gccaacagcccggcggcaagcctgctcaggctggcgctcgaagcggtgttccggccaggc
gatccggtcggtctcttgtccctgctcaagcatccgctgctctgtctgggtctggggaga
gccgacgtgcgccatgcggcggaactggtcgaactggtggcgctgcgcggaggcaccggc
cgccccgacatcgcttcgctgccggacttgttcgaaacccgcctcactggcttcgacgaa
ggcagccggccgcccttctgggttgcgcggctgaccgtgcgcgccattgaaagcgcgcgg
gatttgctcgaacgtctcaaccgagcgctggcgccgcttgcagcgtttcgcggccaggcg
accgccgaccttgccgcgctggtcgaagccagcgtggtggcgttggaggttctcggccgt
gccgccgatggcgggcttggcgaactctacgccggcgatgccggcgaaaaactcgccgaa
ttgctgcgcgggctggtcgcggctccggcaacgctgtcgttcgcggcgaacgagtggccc
gacgtgatggatgcgctgatcgcacccgaaacggtcaagccggcacaaggcaccgaccgg
aacatcgccatctggggcgcgctggaagcacggctgcaggatgtcgacacgctggtcatc
ggcgggctcaacgaaggcgtgtggccgcgcaagcccgagagcgaccgcttcatgtcgcgg
ctgatgaagaccggcatcgacctcgagccgcccgaacggcgcatcggccttgccgctcat
gatttccagatggcgatgggcgcggggaaggtgctgttggcgcgctcggcgcgttccggc
gacgcaccggcggtcccgtcacgctggctgcagcggctgctgaccttcatcggcaacgac
caggcggcaacactgcgccggcgaggcgacgagctgctcgcctgggcgcgtgcgctggat
accggccctaagcaagatttcgcaccacggccgcagcccaagccgccgctgtcggtgcgc
ccgacgcacttctccgtcaccgagatcgagaccctgcgccgcgacccctacgccgtctat
gccaggcggatcctcggcctgatgccgcttgagccgctcatccgcgatcccggtgcggcc
gagcgcggcacgctgttccacgccattctccacctgttctcctccagcgtggccgacccg
cgcgcgccagacgcgcttgccggccttatcgctgccgggcgcgcctgttttgccgaggcc
gccctgccgcccgatgtcgaggcggtgtggtggccgcgcttcgaaaaactcgccgccaac
atcgtcgaatgggaacgcacccgcgccgacgcggtgatacggcggcatgccgaggagcgc
gccggaaaaaccgtcgtcggccagtccggcgtgacgctgtccggttatgccgaccgcgtc
gacctgctggccggcggcatggccgacatactggactacaagaccggctcctcgccctcc
aaggcacaggcacacacgctgctggccccgcagctggcgctcgaaggcgcactgctcagg
cgcggtgccttcaaggatctgggcgcatgcgagccctcgcaactggccttcatcaggctg
aagccgaacggcgaggtgttcgaagagtccattctcgagcacaatcgccagccgcgaacc
gcttccgatctggcggaagaagcctgggcacggctggaaaagctgctgatccattatgcc
gacccgaagaccggctatctgtcgcgggcgctgccgtttcgcgaaggcgagaccgatggc
gattacgaccatctcgcccgcgtgctcgaatggtcggccggcggcgatgccggtgacgag
ggaggggaggcatga
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