Mesorhizobium opportunistum: Mesop_0405
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Entry
Mesop_0405 CDS
T01542
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
mop
Mesorhizobium opportunistum
Brite
KEGG Orthology (KO) [BR:
mop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mop03400
]
Mesop_0405
Enzymes [BR:
mop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mesop_0405
DNA repair and recombination proteins [BR:
mop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Mesop_0405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_30
OSBS_N
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AEH84900
UniProt:
F7Y1S2
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All DBs
Position
445715..449215
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AA seq
1166 aa
AA seq
DB search
MKKAYPIPSDTATSQARAADPQNSAWVSANAGSGKTHVLAQRVIRLLLNGTDPSKILCLT
YTRAAAANMSNRVFSTLSEWTSLGDADLAARIEALEGRRPDRDTMRRARRLFAEALETPG
GLKIQTIHAFCESVLHQFPLEANIPSHFEMLDSQMEASLFAAARREMISAAGDADLTEAF
ATVLERGGEAGLDALLGEIVRKRDGLRYFLDAVGRDSFQPLFDEFHFRPGQTAEGIAASA
WPLPGFLPDYFTGFAQAAESTDARSVLNNILPYARRAFAESDPVRRLQQLARAFLKTDGD
PYDPAKAFKKALTDRLPDLADRYLSASSAIIETVDRLALFRMLEGTAAALTIADWLIARY
EVLKRGRGFLDFNDLITRTVNLLARPDAGPWVQYKLDQGIDHILLDEAQDTSPDQWEVVK
RLAEEFFAGFGARDRVHRTVFAVGDEKQSIYSFQGAAPDSFADSRLLFSSRVRDAEASFA
DLKLTWSFRSTDDVLSAVDRVFADPVVRRGISHDPDPLSHKAIRTDAPGYVEVWPSIGAD
IVDEPDDWTQAIDHAHAPAVRVAENVATTIAGWIGNGEIIEGRGKRLRPGDVLVLVRKRD
SFVHALTRALKRRDIPVAGADRLSLPGHIAVKDLIALGRLLIQPQDDLSLAAVLRSPIFD
LPEETLFALAAQRAPGLSLATSLRQHAGESEALAIVVAQLDIWTDEAAFKPVFEFYAGLL
ARDGVRRKMIARLGPEAGDILDEFLSFCLAEERTGLPGLEAFLSTLENAGPEIKREMDQT
RDEVRVMTVHAAKGLEAPVVFLVDGGSAPFSDQHLPRLMPFDGSGWVGKGYLWRSASDVA
NGFSKAAAARARELADDEYRRLLYVGMTRAEDRLIVCGYHGKRAPNTGTWHSIVSRALIG
APESEQRAHPAGGEPVYRFHVTELPPVALATAEQARQTDAFGPLPTNLFRPLPPFEDLPR
PLSPSGASALIEEGKETVVDKASPVLDADAEPGFAVLRGLALHKLLQMLPGIAEDQREGA
AARYLARTGAEWPPAEREKALASVIAILADPYLGQLFAPSSRAEVAIMGSLEVRGKNRSI
SGKIDRLAVTPDAVSIVDYKTNRPAPAGLAEVPPAYLLQLALYRALLQPLYPGREVKAAL
LFTEAPRLIELPAGAMDDALARLTGA
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggcctatcccatcccgagcgacacggcgaccagccaagcccgcgcggccgat
ccccagaactccgcctgggtgtcggccaatgccggctccggcaagacccatgtgctggcc
cagcgtgtcatccggctgctgctcaacggcaccgatccgtcgaagatcctgtgcctgacc
tatacgcgcgccgcggccgccaacatgtcgaaccgggtgttctcgacgctgtcggaatgg
acatcccttggtgacgcggatctcgccgccaggatcgaagcgctggaaggccgccggccc
gaccgcgacaccatgcgccgcgcgcggcgcctgttcgccgaggcgctggagacgccgggc
gggctgaagatccagaccatccacgccttctgcgaatccgtgctccaccagttcccgctg
gaagccaacatcccgtcccatttcgagatgctggacagccagatggaagcgtcgctcttt
gccgccgcgcgccgggagatgatttcggccgccggtgacgcggatttgaccgaggccttc
gccaccgtgctggaacgcggcggcgaggccgggctcgatgccttgctgggcgagatcgtg
cgcaagcgcgacggcttgcgttatttcctcgatgcggtcgggcgtgacagcttccagccc
ttgttcgatgaattccatttccgtcctggccagaccgccgagggcatagcggcctcggcc
tggccgttgcccggcttcctgccggactatttcaccggctttgcccaggccgccgaatcc
accgacgccaggtcggtgctcaacaacatcctgccctatgcgcgccgggccttcgccgag
agcgatcccgttcgccgcctgcagcagcttgcaagggccttcctcaagaccgatggcgat
ccctacgatccggcaaaggctttcaagaaagcgctgaccgaccggctgccggatctggcc
gaccgctacctgtcggcatccagcgccatcatcgagaccgtcgaccggctggcgctgttc
cggatgctggaaggcacggctgccgcgctgaccatcgccgactggctgatcgcccgctac
gaggtcttgaagcgcggccgcggctttcttgacttcaacgatttgatcacccgcacagtc
aacctcctggcgcggccagatgccggcccctgggtgcagtacaagctcgaccagggcatc
gatcacatcctgctcgacgaggcgcaggacaccagcccggatcaatgggaagtggtgaag
cggctggcggaagaatttttcgccggcttcggtgcccgcgaccgtgtccaccgcacggtc
ttcgccgtcggcgacgagaagcagtcgatctattccttccaaggcgcggccccggattcc
ttcgccgacagccggctgctgttttcaagcagggtgcgcgacgccgaggcatctttcgcc
gacctcaagctgacctggtcgttccgctcgaccgacgatgtgctttccgccgtcgaccgc
gtctttgccgatcctgtcgtgcggcgcggcatcagccacgatcccgacccgctgagccat
aaggcgatccgcaccgacgcgccgggctatgtcgaggtgtggccgtcgatcggtgccgat
atcgtcgacgagcccgacgactggacgcaggcgatcgaccacgcccatgcgccggcggtg
cgggttgccgagaatgtggcgacgaccattgccggctggatcggcaacggagagatcatc
gagggccgcggcaagcggctgcggccgggcgacgtgctggtgctggtgcgcaagcgcgac
agcttcgtccacgcgctgacgcgggcgctcaagcgccgtgacattccggtcgccggcgcc
gaccggctgagcctgccgggccacatcgcggtcaaggacctgatcgcgctcggccgcctg
ctgatccagccgcaggacgatttgtcgctcgccgccgtgctgcgcagcccgatcttcgac
ctgccggaggagacgctttttgcgctcgccgcgcaacgagcgcccggcctgtcgctggcc
acgtcgctgcgccagcatgccggcgaaagcgaagcgctggcgatagtcgtcgcccaactc
gacatctggaccgatgaggccgccttcaagccggtgttcgaattctatgccggccttctg
gcccgcgatggcgtgcgccgcaagatgatcgcgcggctcggcccggaagccggcgacatc
ctcgatgagttcctgagtttctgccttgccgaggaacgaaccggcctgcccgggctggaa
gccttcctgtcgacgctggaaaacgccgggcccgagatcaagcgtgagatggaccagacc
cgcgacgaggtccgcgtcatgaccgtgcatgccgccaagggcctggaagcgcctgtcgtg
ttcctggtcgacggcggctccgccccgttcagcgaccagcatttgccacgcctgatgcca
ttcgacggctcgggctgggtcggcaagggttatctctggcgttcggccagcgatgtcgcg
aacggcttctcgaaggcggcggcggcgcgagcccgcgaactcgccgacgacgaataccgc
cggctgctctatgtcggcatgacccgcgccgaggaccggctgatcgtctgcggctatcac
ggcaagcgggcgccgaacaccggcacctggcattcgatcgtcagccgtgcgctgatcggg
gcgccggagagcgaacagcgtgcgcatcctgccggcggcgagccggtgtatcgtttccat
gtcaccgagctgccgccagtggcgctcgccacggcagagcaagcgaggcaaacggacgct
ttcggcccgttgccgacgaacctgtttcgacccttgccgcccttcgaggatctgccgcgg
ccgctctcgccatccggcgcctcggcgctgatcgaagaaggcaaggaaacggtggtcgac
aaagcttcgccggtgctcgatgccgatgccgagccaggatttgccgtgctgcgcgggctc
gcgctgcataaattgctgcaaatgctgcccggcattgccgaggaccaacgggagggcgcg
gcggcacgctacctcgcgcgaacgggtgcggaatggccgccggcagagcgcgaaaaagcc
ctggcctcggtcatcgccatcctagccgacccctatctcggccagctgtttgcgccatcc
tcgcgcgcggaggtcgcgatcatgggcagcctggaggtaaggggaaaaaaccgctcgatt
tccggcaagatcgaccggctggcggtgaccccggacgcggtctcgatcgtcgactacaag
accaaccggccggcgccagccggtctggccgaggttccgccggcctatctgctgcagctc
gcgctttatcgcgccctgctgcagccgctttatcccgggcgcgaggtcaaggcggccctg
ctgttcaccgaagcgccacggctgatcgaactgccggccggggccatggatgacgccctt
gcccgactcacgggagcgtga
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