Mesorhizobium opportunistum: Mesop_0807
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Entry
Mesop_0807 CDS
T01542
Name
(GenBank) putative RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mop
Mesorhizobium opportunistum
Brite
KEGG Orthology (KO) [BR:
mop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mop03021
]
Mesop_0807
Transcription machinery [BR:
mop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mesop_0807
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r2
Sigma70_r4_2
TPR_14
TPR_2
Motif
Other DBs
NCBI-ProteinID:
AEH85300
UniProt:
F7Y8Z0
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All DBs
Position
complement(857352..858611)
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AA seq
419 aa
AA seq
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MDSRPEIVRAAAEAAARQSYGKLVAWLSARTRDVAAAEDALADAFAAALERWPRTGVPDK
PEAWLLAVARRRRVDAVRRRLTSEAGREHLRLIAEEAEARMTDEDLPDEDMPDERLRLMF
ACAHPAIESSVRAPLILQTILGFDAAAIASAFLVSPATMGQRLVRAKTRIRETGIPFRVP
ERAELGERLDAVLEAIYAAFAEGWSDPAGTETQRRNLATEGIWLGRLVASLMPDEPEALG
LLALMLFAEARRAARRDDEGDFVPLAQQDCELWDRALINEAEALLSRAAQSGVIGRYQLE
AAVQSAHAARRLTGRTDWVAIRELYDALFSIAGSPVVAINRAVAIAEAEGAVAGLAALYV
LGDDKRLDDYQPYWAARAGLLARLGQVPQASEAYDRAIGLERDPAVRRFLQGKRAALRN
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggacagtcgtccggagatcgtccgggcggccgccgaggccgccgcccggcaaagctat
ggcaagctggtcgcctggctgtcggcgcgcacgcgcgacgtagccgccgccgaggacgcg
ctggccgatgcctttgccgcggcgctcgaacgctggccgcgcaccggcgtgcccgacaag
ccggaagcctggctgctggcggtggcgcgccggcggcgtgtcgatgcggtgcggcggcgg
ctgaccagcgaagccggccgcgagcatctcaggctgatcgccgaggaagcggaggcgcgc
atgaccgacgaagacttgcccgacgaagacatgcccgacgaacgcttgcggctgatgttc
gcctgcgcccatccggcgatcgaatcgagcgtgcgtgcgccgctgatcctccagaccatt
ctgggtttcgatgccgcggccatcgcctctgccttcctggtctcgccggcgacgatgggc
cagcgcctggttcgtgccaagacccgtatccgcgaaaccggcattccgttccgcgttccg
gagcgggccgaactcggcgagcggctggacgcggtgctggaagccatctacgccgccttt
gccgaaggctggtcggacccggccggcaccgaaacacaacgccgcaacctggcgaccgaa
ggcatctggctcggccggctggtggcctcgctgatgccggatgagccggaggcgctgggt
ctgcttgcgctgatgctgtttgccgaggcccgccgggctgcccggcgcgatgacgaaggc
gacttcgtgccgttggcgcaacaggattgcgagctgtgggaccgtgccctcatcaatgag
gcggaggcgctgctgtcccgcgccgcgcagagtggcgtcatcggccgttaccagctcgag
gccgcagtccagtcggcgcacgcggcgcgacggctgaccggtcgcaccgactgggtggcg
atccgcgagctctatgacgcgctgttttcgatcgccggatcgcccgtcgtggcgatcaac
cgtgcggtggcgatcgccgaggccgagggcgccgtggcgggactggcggccctttacgtg
ctgggtgacgacaagcggcttgacgactatcagccttattgggccgcgcgcgccgggctt
ctggccaggctcgggcaagtgccgcaggcgagcgaagcctatgatcgagcgatcggcctc
gagcgcgacccggcggtacgacgcttcctgcaaggcaaacgggcagcgctgcgaaattga
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