KEGG   Mesorhizobium opportunistum: Mesop_0901
Entry
Mesop_0901        CDS       T01542                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mop  Mesorhizobium opportunistum
Pathway
mop03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Mesop_0901
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mop03021]
    Mesop_0901
   03019 Messenger RNA biogenesis [BR:mop03019]
    Mesop_0901
Transcription machinery [BR:mop03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Mesop_0901
Messenger RNA biogenesis [BR:mop03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Mesop_0901
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT S1CSD-TOTE-2 AAA_25 AAA_22 DnaB_C NPHP3_N
Other DBs
NCBI-ProteinID: AEH85391
UniProt: F7YA54
LinkDB
Position
951234..952499
AA seq 421 aa
MQEMKLAEFKNKKPPELIAYAESLEVENASVMRKQELMFAILKKLAAQEIEIIGDGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVN
TINFDDPEKIRHKIHFDNLTPLYPTKRLKMEIDNPTSKDISPRVIDLVAPIGKGQRALIN
AQPRTGKTVLMQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNCEIQLDRKVADKRIYPA
MDILKSGTRKEDLLVPRADLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNADFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaagaaatgaaactcgcagagttcaagaacaagaaaccgccagagctgatcgcttat
gccgaatcgctcgaggtggaaaacgccagcgtcatgcgcaagcaggagctgatgttcgcc
atcctgaagaaactggccgcccaggagatcgagatcatcggcgacggggtggtcgaggtg
ctgcaggacggcttcggcttcctgcgctcggccaatgccaattatctgcccggtcccgac
gacatctacatctcgccctcgcagatccgccgcttttcattgaagaccggcgacaccgtc
gaggggccgatccgtagcccgaaggaaggcgagcgctatttcgcgctgctcaaggtcaac
acgatcaatttcgacgaccccgaaaagatccgccacaagatccacttcgacaatctgacg
ccgctctatccgaccaagcggctgaagatggagatcgacaatccgacgagcaaggacatc
tcgccgcgcgtgatcgacctggtggcgccgatcggcaagggacagcgcgcgctgatcaac
gcgcaaccgcgcaccggcaagacggtgctaatgcagaacatcgcccattcgatcaccgcc
aaccacccggaatgctatctgatcgtgctgctgatcgacgagcggccggaagaagtgacc
gacatgcagcgctcggtgaagggcgaggtcatatcctcgactttcgacgaaccggcggtg
cgccacgtgcaggtcgccgaaatggtgatcgagaaggccaagcgcctggtcgaacacggc
cgcgacgtcgtcatcctgctcgattccatcacccgcctcggccgcgcctacaacaccgtg
gtgccgtcctccggcaaggtgctgaccggcggtgtcgacgccaacgccctgcagcggccg
aagcgcttcttcggcgcggcccgcaacatcgaggaaggcggctcgctgaccatcatcgcc
accgcgctgatcgacaccggcagccgtatggacgaagtcatcttcgaagagttcaagggc
accggcaactgcgaaatccagctcgaccgcaaggtcgccgacaagcgcatctacccggcc
atggacatcctcaagtccggtacccgcaaggaggacctgctggtgccgcgcgccgacctg
cagaagatcttcgtgctgcgtcgcatcctggcgccgatgggaaccaccgacgcaatcgag
ttcctcatcgacaagctgaagcagaccaagaccaacgccgacttcttcgattcgatgaac
acgtaa

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