Mesorhizobium opportunistum: Mesop_1227
Help
Entry
Mesop_1227 CDS
T01542
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mop
Mesorhizobium opportunistum
Pathway
mop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mesop_1227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mop03019
]
Mesop_1227
03400 DNA repair and recombination proteins [BR:
mop03400
]
Mesop_1227
Enzymes [BR:
mop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mesop_1227
Messenger RNA biogenesis [BR:
mop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mesop_1227
DNA repair and recombination proteins [BR:
mop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mesop_1227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
AAA_22
DUF7466
Motif
Other DBs
NCBI-ProteinID:
AEH85711
UniProt:
F7YFG6
LinkDB
All DBs
Position
1275654..1277468
Genome browser
AA seq
604 aa
AA seq
DB search
MRAEDPKRRVLKDVFGFDDFRPGQAAVMDALLGGRHVLAVMPTGAGKSLCYQVPALVLGG
LTIVVSPLVALMQDQVAALRLAGVAADTINSSLDREANVAAWRRVASGQTRLLYLAPERL
MTERMLEALARLDVSLIAIDEAHCISQWGPAFRREYEDLSRLRGIFAKVPIIAVTATADE
STRTDIAVRLFAERVETMVLGFDRPNIKLAIAAKQDSKRQLLNFIERHPGRSGIVYCLSR
KKTEEMAAFLEKNGVTALAYHAGMTKDAREANQNAFMTLSGVVMVATIAFGMGIDKPDVA
YVFHTDMPGSLEAYYQEIGRAGRDGREAEAHMLFGLGDIRMRRLFIDDEDASPEHKRRSH
RRLDTLIGYCETAQCRRQVLLGYFGEEAQPCGNCDNCLDQVPRADGAAEARIILAAVSQS
GERFGAAHVIDILTGHETEKVLARGHERLASFGSGVAHKKDFWMSLIRQLVAGGFLEPDP
SGHGGLAIADKGHALGRGEVAFHYRVEVRGRALRKMRAAEGSRAEGVDASLLATLKSVRL
RLAKERQVPAYVVFSDRTLIDMAERCPRDLDAFAEVNGVGAAKLKEFGQAFLAAIAAHQS
DGSA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcggaggatcccaagcggcgcgtcctgaaggacgtgttcggcttcgacgatttc
cgacccggccaggccgctgtcatggacgcgctgctcggcgggcgccatgtgctggccgtg
atgccgacaggggcgggcaagtcgctctgctaccaagtgccggcgctggtcctgggcggg
ctcaccatcgtcgtttcgccgctggtggcgctgatgcaggatcaggtcgccgccttgcgg
ctggcaggcgtcgccgccgacacgatcaattcctcgctcgaccgcgaggccaatgtcgcg
gcctggcgccgcgtggcttctggccagacgcggctgctttacctggcgccggagcggctg
atgaccgagcgcatgctcgaggcgctcgccaggctcgacgtcagcctgatcgcgatcgac
gaggcgcattgcatttcgcaatggggcccggcgttccggcgcgaatatgaggatttgtcg
cggctgcgcggcatttttgcgaaagtgccgatcatcgccgtgacggcgaccgcggatgag
agcacgcgcaccgacatcgccgtccggctgttcgccgagcgtgtcgaaacgatggtgctg
ggtttcgaccggcccaacatcaagctcgccatcgcggccaagcaggacagcaagcgccag
ctgctcaacttcatcgagcgtcatcccggccgcagcggcatcgtctattgcctgtcgcgc
aagaagacggaggagatggcagctttcctggagaagaatggcgtcaccgcgctcgcctat
catgccggcatgaccaaggacgcgcgtgaagcgaaccaaaacgccttcatgacgctctcg
ggcgtcgtcatggtggcgaccatcgccttcggcatgggcatcgacaagcccgatgtcgcc
tatgtcttccacaccgatatgccgggcagcctcgaagcctattatcaggagatcggccgc
gccggccgcgacgggcgggaggccgaggcgcatatgttgttcggccttggcgacatccgc
atgcgccggctgttcatcgacgacgaggatgcgtcgcccgagcacaagaggcgctcgcat
cgccggctcgacacgctgatcggctattgcgagacggcgcaatgccgccgccaggtgctg
ctcggctatttcggcgaggaagcccagccttgcggcaattgcgacaattgcctcgaccag
gtgccgcgcgccgatggcgccgccgaggcgcgcatcatcctggccgcggtctcgcagagc
ggcgaacgcttcggcgccgcccacgtcatcgacatcctgaccggccatgaaaccgagaag
gtgctggccaggggtcatgagaggctcgccagcttcggcagcggcgtggcgcacaagaag
gatttctggatgtcgctgatccgccagcttgtcgctggcgggttcctggaaccggacccg
agcggccatggcggcctcgccatcgccgataaggggcatgcgctcggtcggggcgaggtg
gcgttccactaccgcgtcgaggtgcgcggccgagccttgcgcaagatgcgagcggccgag
ggttcgagagccgaaggcgtcgatgcctcgttgcttgccacgctcaaatccgtgcggctg
cgattggcgaaagagcgccaggtgccggcctatgtggtgttttccgatcgcacgctgatc
gacatggccgagcgctgcccgcgcgatctcgacgccttcgccgaagtgaatggcgtgggc
gcggcgaagctcaaggagttcggccaggcttttctcgcggcaatcgcggcgcaccagtcc
gatgggtcggcctga
DBGET
integrated database retrieval system
