Mesorhizobium opportunistum: Mesop_3580
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Entry
Mesop_3580 CDS
T01542
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mop
Mesorhizobium opportunistum
Pathway
mop03420
Nucleotide excision repair
mop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mesop_3580
03430 Mismatch repair
Mesop_3580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mop03400
]
Mesop_3580
Enzymes [BR:
mop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mesop_3580
DNA repair and recombination proteins [BR:
mop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mesop_3580
MMR (mismatch excision repair)
Other MMR factors
Mesop_3580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AEH88022
UniProt:
F7YFZ1
LinkDB
All DBs
Position
complement(3691692..3694391)
Genome browser
AA seq
899 aa
AA seq
DB search
MSGFSEDMPFFDEPNARPTAPSGIAARAMAARGGQNNAPDYLKGLNPEQRLAVETTEGPV
LVLAGAGTGKTRVLTTRIAHILATGKAFPSQILAVTFTNKAAREMKQRIGILIGEGNVEG
MPWLGTFHSIGVKLLRRHAELAGLRSDFTILDTDDVVRLIKQLIQAEGLDDKRWPAKQFA
QMIDGWKNKGQGPADIAEGDARSFANGKGRELYKAYQERLQTLNACDFGDLLCHPIRIFR
ANPDVLKDYHRRFKYILVDEYQDTNTAQYMWLRLLAQRPQSSPLEGEVPAKRAEGVAPEG
TAAASRTAARTPPDRASPGHPPLKGEGNPRPATVNICCVGDDDQSIYGWRGAEVDNILRF
DKDFPGATIIRLERNYRSTAHILGAASHLIAYNEGRFGKTLFTDRNDPEDGKVNVHAAWD
SEEEARAIGETIEAYQRQKHNLNDMAILVRASFQMRAFEDRFITLGLNYRVIGGPRFYER
MEIRDALAFFRVVANGGDDLAFERIVNVPKRGLGEATIRQIHDTARALRIPMLEAAANLA
ESDELKPKPRAALREVAANFERWQKALETTPHTELAETILEESGYTDMWKNDRSAEAPGR
LENLKELVRSMEEYESLRSFLEHVALVMDAEQNAGLDAVSIMTLHSAKGLEFETVFLPGW
EEGLFPHQRALDEGGRSGLEEERRLAYVGLTRAKKNLHIWFVSNRLIHGLWQSTIPSRFL
EELPNSHVEVAEAGNSYGGYGNPYGGGSFASGRGGGQGPGRQNPYGASRFDNVGANTEKS
GAFSNTYSTPGWQRAQANRTEATDRNWGTRSGHQVERIGYGETDSGYGAGRTSIKGRTID
GELVAKSVSDTPSAFSVGDRVFHQKFGNGNIAAIEGNKLTIDFDKAGQKRVLDGFVAAV
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcttttccgaagacatgccctttttcgacgaacccaatgcgcggcccacggcc
ccgtcgggcattgccgcgcgcgccatggccgcccgcggcggccagaacaacgcgcccgac
tatctcaagggtttgaatcccgaacagcggctggcggtggaaaccaccgaaggcccggtt
ctggtgctggccggcgccggcaccggcaagacccgcgtgctgaccacccgcatcgcccac
atcctcgccaccggcaaagccttcccgtcgcagatccttgcggtgaccttcaccaacaag
gccgcgcgcgagatgaagcagcgcatcggcatcctgatcggcgaaggcaatgtcgagggc
atgccgtggctcggcaccttccactcgatcggcgtgaaactgctgcgccgccacgccgag
cttgccggcctgagatccgacttcaccatcctcgacaccgacgacgtcgtgcggctgatc
aagcagctgatccaggccgagggtctggacgacaagcgctggccggccaagcagttcgcc
cagatgatcgacggctggaagaacaagggccaaggtccggccgacatcgccgagggcgac
gcgcgcagctttgccaacggcaagggccgtgagctctacaaggcctaccaggaacgcctg
cagacgctgaacgcctgcgatttcggcgatcttctgtgccatccgatccgcatcttccgc
gccaatccggacgtgctgaaggactaccacaggcgcttcaaatacatcctcgtcgacgaa
taccaggacaccaacaccgcccagtacatgtggctgcggctcttggcgcagcggccgcaa
tcctcccccctcgagggggaggtgcccgcgaagcgggcggagggggtcgccccagaaggc
accgctgcagcgtcgcgcactgccgcgaggaccccacccgaccgggcttcgcccggccac
cctcccctcaagggggagggaaatccgcgtccggccaccgtcaacatctgctgcgtcggc
gacgacgatcaatcgatctatggctggcgcggcgccgaggtcgacaacatcctgcgcttc
gacaaggattttcccggcgccaccatcatcaggctggagcgcaactaccgctccaccgcg
cacatcctgggcgctgcctcccatctcatcgcctacaatgagggccgcttcggcaagacg
ctgttcaccgatcgcaacgatcccgaggacggcaaggtcaacgtccacgccgcctgggat
tccgaggaggaagcgcgtgccatcggcgagaccatcgaggcctaccagcgccagaagcac
aatctgaacgacatggcgatccttgtccgcgcgtccttccagatgcgcgctttcgaggat
cgcttcatcacgctcggcctcaactaccgcgtcatcggcggtccgcgtttctacgagcgc
atggaaatccgcgacgcgctggccttcttccgcgtcgtcgccaacggcggcgacgacctc
gccttcgagcgcatcgtcaacgtgcccaagcgcgggctgggtgaagccaccatccgccag
atccacgacacggcgcgggcgctgcgcatcccgatgctggaggctgccgccaacctcgcc
gaaagcgacgagctgaagccgaaaccgcgcgccgcgctgcgcgaggtcgccgccaatttc
gaacgctggcagaaggcgctggaaaccacgccgcataccgaactcgccgagacaattctc
gaagagagcggctacaccgacatgtggaagaacgaccgctcggccgaagcccccggccgg
cttgagaacctcaaggaactggtccgctcgatggaggagtacgagtcgctgcgctccttc
ctcgaacatgtcgcgctggtcatggatgccgagcagaatgccgggctcgacgccgtctcg
atcatgacgctgcattcggccaagggcctcgaattcgagaccgtcttcctgcccggctgg
gaggaaggcctgttcccgcaccagcgcgcgctcgacgaaggcggccgttcagggctggag
gaagagcggcggctggcctatgtcgggctgacgcgggccaagaagaacctgcatatctgg
ttcgtctccaaccgcctcatccacggcctctggcaatcgaccatcccgtcgcgcttcctc
gaggaactgccgaactcccatgtcgaggtcgccgaagccggcaattcctatggcggctac
ggcaatccctatggcggcggctcgttcgcatcgggccgtggcggcggccagggaccagga
agacagaacccgtacggcgcctcgcgcttcgacaatgtcggtgccaacaccgaaaaatcc
ggcgccttctcaaacacctattcgacgccgggctggcagcgcgcgcaggccaaccgcacc
gaggcgaccgaccgcaactggggcacgcgctccggccatcaggtcgagcgcatcggctat
ggcgagaccgacagtggctacggcgccggccgcacctcgatcaagggccgtaccatcgac
ggcgaactggtcgccaaatccgtctccgacacgccatccgccttcagcgtcggcgaccgc
gtcttccatcagaaattcggcaacggcaacattgcggccatcgaaggcaacaagctgacc
atcgacttcgacaaggccggccagaaacgcgttctggacgggttcgtcgcggcggtgtga
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