Mesorhizobium opportunistum: Mesop_4085
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Entry
Mesop_4085 CDS
T01542
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mop
Mesorhizobium opportunistum
Pathway
mop03030
DNA replication
mop03430
Mismatch repair
mop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mesop_4085
03430 Mismatch repair
Mesop_4085
03440 Homologous recombination
Mesop_4085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mop03032
]
Mesop_4085
03400 DNA repair and recombination proteins [BR:
mop03400
]
Mesop_4085
Enzymes [BR:
mop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mesop_4085
DNA replication proteins [BR:
mop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mesop_4085
DNA repair and recombination proteins [BR:
mop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mesop_4085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AEH88519
UniProt:
F7Y5W3
LinkDB
All DBs
Position
4196674..4200201
Genome browser
AA seq
1175 aa
AA seq
DB search
MADERLPRDPLKREAAIAAARPEVPARPFVHLRVHSAYSLLEGALQIGKIVGHAVKDEAP
AIAVTDTNNLFGALEFAQKAVKDGIQPIIGCQVALAFSGENSDGQRDRRRQGPEMRPVVL
LAATEAGYSNLVRLVSGVYLETPPGEAVHLTTETLAGQTDGLICLSGGPRGPIGNALKED
RRDLAETRLLTLKTLFGDRLYVELDRVAGYDRVIEHSTIELAYAHELPLVATNEAFFSSR
DDYEAHDALIAIAEGSVVAVDTRRRLSPDNFLRSQADMAKLFADLPEAIDNTIEIALRCS
YYPKTRSPILPRFTGGDTTDKDAAEKAEAEELARQAREGLDARLALHGPTPGYTVEQYRE
RLEFELGIIEKMKFPGYFLIVADFIKWAKAQGIPVGPGRGSGAGSLVAYSTTITDIDPLR
FSLLFERFLNPDRVSMPDFDIDFCQDRREEVIRYVQQKYGRDQVGQIITFGTLQARAVLR
DVGRVLQMPYGQVDKLSKMVPQNPANPVKLADAIANEPRFAEEAEKEPIVQTLLDMAQKL
EGLYRHASTHAAGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKT
LTVLETAVKLIRRRGIDIDLATIPLDDPDTYSMLSRGEVVGVFQVESAGMRKALIGMRPD
CIEDIIALVALYRPGPMENIPTYNARKHGEEEMASIHPKIDHLVKETQGVIVYQEQVMQI
AQELSGYSLGEADLLRRAMGKKIRAEMDKQRERFVSGAVERGVAKPQADFIFDLLAKFAD
YGFNKSHAAAYAVVSYQTAYLKAHYPVEFLAASMTLDMGNTDKLADFRQDALRLGIEVLA
PSVMTSFRAFEVGENRIYYSMAALKGVGDAAVEHIVAVRGEKPFKNLADFCERVDPKIVG
KRVFESLIMAGALDCFGHDRAAMLAGVERMMGLASLAQQNAVSGQADIFGASLGAQSQAL
NLPATDPWLAADRLHREFQVVGFYLSAHPLDEYKAALQKMRVQNWAEFSAAVKRGATAGR
LAGTVTSKQERKTRTGNKMGVVAFSDTSGQYEAVLFSEGLAQYRDLLEAGRSVVITVAAE
DRPEGVNLRINSVQSLEDEASRIQKALRIFVRNDGPASMIQSQLTQRGESQVSIIVIKDE
AQGEVEIALQGGYRVSPQIASAMRAVPGVVEVELV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgagagacttccacgcgaccccctgaagcgcgaagccgcgattgcggccgcg
cggccggaggtgccggcgcggccgttcgtccatctgcgcgtgcattcggcctattccctg
cttgaaggcgcgcttcagatcggcaagatcgtcggtcacgccgtgaaggacgaagcgccg
gctatcgccgtcaccgacaccaacaatctgttcggcgcgctcgaatttgcgcagaaagcg
gtcaaggacggtatccagccgatcatcggctgtcaggtcgcgctcgccttttccggagag
aacagcgacggccagcgcgaccgccggcggcagggtccggagatgcggccggtcgtgctg
ctcgcggcgaccgaagccggctattccaatctggtccggcttgtcagcggcgtctacctg
gaaacaccgcccggcgaggcggtacacctgaccaccgagaccctggccgggcagaccgac
gggctgatctgcctcagcggcgggccgcgcggcccgatcggcaatgcgttgaaagaggat
cgccgcgacctggccgagacgcggctattgaccttgaaaacactctttggcgaccgtctt
tatgtcgagctggaccgggttgctggctatgacagggtcatcgagcactcgacgatcgag
ctcgcctacgcgcacgaacttccgcttgtcgccaccaacgaggcctttttctcctcgcgc
gacgattatgaggcgcacgatgcgctgattgcgatcgccgagggctcggtggtcgccgtc
gacacccgccgccggctgtcgccggacaatttcctgcgcagccaggccgacatggcaaag
ctgttcgccgacctgccggaagctatcgacaacacgatcgagatcgcgctgcgctgttcc
tattatccaaaaacccgcagtccgatcctgccgcgcttcaccggcggcgataccaccgac
aaggacgccgccgaaaaggccgaggccgaggaattggcccgccaggcgcgcgaggggttg
gacgcgcggctcgccctgcacggtccgacgccgggctacacggtcgaacagtaccgcgag
cggctcgaattcgagctcggcatcatcgagaagatgaaattcccgggctatttcctgatc
gttgccgacttcatcaaatgggccaaggcgcaaggcattccggtcgggccgggccgtggg
tcgggcgccggctcgcttgtcgcctattcgacgaccatcaccgacatcgatccgttgcgc
ttctcgctgctgttcgagcgcttcctcaatccggaccgtgtgtcgatgcccgatttcgac
atcgacttctgccaggatcgccgcgaggaggtgatccgttacgtccagcagaaatacggc
cgcgaccaggttggccagatcatcaccttcggtacgctgcaggcccgcgcggtattgcgc
gacgtcggccgcgtgctgcagatgccttatggccaggtcgacaagctgtccaagatggtg
ccgcagaacccggccaatccggtgaaactcgccgatgccatagccaacgaacctcgcttc
gccgaagaagccgagaaggagccgatcgtccagacgctgctcgacatggcgcagaagctg
gagggtctctatcgccacgcctcgacccacgccgccggcatcgtcatcggcgaccggcct
ttgtcggagctggtgccgatgtatcgcgatccgcgctcggacatgccggtcacccagttc
aacatgaaatatgtcgagcaggccggactggtgaagttcgacttcctcggcctgaaaacg
ctgacggtgctggagacggcggtgaaactgatccgccgccgcggtatcgacatcgacctg
gcgacaatcccgctcgacgatcccgacacctactccatgctgtcgcgcggcgaggtggtc
ggcgtgttccaggtggaaagtgccggcatgcgcaaggcgttgatcggcatgcggcccgat
tgcatcgaggacatcatcgccctggtcgcgctctaccgtccgggcccgatggagaacatc
ccgacctacaacgccagaaagcatggcgaggaggagatggcctcgatccatcccaagatc
gaccatctggtgaaggagacgcaaggcgtcatcgtctaccaggaacaggtcatgcagatc
gcgcaggagctgtccggctattcgctcggcgaagccgaccttctgcgccgcgccatgggc
aagaagatccgcgccgagatggacaagcagcgcgagcgcttcgtctccggcgcggtcgag
cgcggcgtggcaaaaccgcaagccgacttcattttcgacctgctggccaagttcgccgac
tatggtttcaacaagtcgcacgccgccgcctacgccgtcgtgtcgtaccagaccgcctat
ctgaaggcgcattatccggtcgagttcctggcggcatcgatgacgcttgacatgggcaac
accgacaagctcgccgacttccgccaggatgcgctgcgcctgggcatcgaggttctggcg
ccgtcggtgatgaccagcttccgcgctttcgaggtcggcgagaaccgcatctattattcg
atggccgcgctcaagggcgtcggcgacgcggcggtcgaacacatcgttgccgtgcgcggc
gaaaaaccgttcaagaaccttgccgacttctgcgaacgggtcgaccccaagatcgtcggc
aagcgggtcttcgaaagcctgatcatggccggcgcgctcgattgtttcggccacgaccgt
gcagcgatgttggccggcgtcgaacggatgatggggctggcctcgcttgcccagcagaac
gccgtttcaggccaggccgatattttcggcgcctcgctcggcgcgcaatcgcaggcgctc
aatctgccggcgacggatccatggctcgccgccgaccggctgcaccgcgaattccaggtt
gtcggcttctatctctcagcccacccgctcgacgaatacaaggctgccctgcagaagatg
cgggtgcagaactgggccgagttttcggccgccgtcaagcgtggcgccaccgccggccgg
cttgccggcacggtgaccagcaagcaggagcgcaagacgcgcaccggcaacaagatgggc
gtggtggccttctctgatacgtcaggccaatacgaggccgtgctgttttcggaagggctg
gcgcaatatcgcgacctcctggaagccggccgctccgtcgtcatcacggtcgcggcggag
gacaggcccgaaggcgtcaatttgcgcatcaattccgtgcaatccctggaggacgaggca
agccgcatccagaaggcgctgcgcattttcgtcaggaacgatgggccggcctcgatgatc
cagtcccagctcacccagcgcggcgaaagccaggtgagcatcatcgtcatcaaggacgag
gcgcagggcgaggtcgagattgccttgcagggcggctaccgcgtctcgccgcagatcgct
tcggcgatgcgcgccgtccccggcgtggtcgaagtggagctggtgtga
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