Mesorhizobium opportunistum: Mesop_4109
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Entry
Mesop_4109 CDS
T01542
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mop
Mesorhizobium opportunistum
Brite
KEGG Orthology (KO) [BR:
mop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mop03032
]
Mesop_4109
03400 DNA repair and recombination proteins [BR:
mop03400
]
Mesop_4109
Enzymes [BR:
mop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mesop_4109
DNA replication proteins [BR:
mop03032
]
Prokaryotic type
DNA Topoisomerases
Mesop_4109
DNA repair and recombination proteins [BR:
mop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mesop_4109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AEH88543
UniProt:
F7Y5Y7
LinkDB
All DBs
Position
complement(4223805..4226417)
Genome browser
AA seq
870 aa
AA seq
DB search
MDVVVVESPAKAKTINKYLGKNYKVLASFGHVRDLPAKDGSVRPDEDFAMSWAVDTASGK
RLADIAKAVKDADGLILATDPDREGEAISWHVLEVLKQKRALKDKPVSRVVFNAITKSSV
LEAMANPRQIDAPLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ESEIERFIREEYWQIAAILGTPRNEAFEARLTAFERKKLQKLDISNKAQADDVKAMLEGA
AFKALSVEAKPTKRNPGPPFTTSTLQQAASSGLGFSATRTMQVAQRLYEGMEIGGETTGL
ITYMRTDGVQMAPEAIDAARDAIAKEFGPKYLPEKPRVYTTKAKNAQEAHEAIRPTDFMR
TPASVRQYLDSDQMRLYELIWKRAISSQMQPAEIERTTVEIEAVNGSRTAELRAVGSVVR
FDGFIAAYTDQKEDDAEDEENRRLPEIRVGEQLARQAINATQHTTEPPPRYSEATLIKKL
EELGIGRPSTYTAILKTLEDRDYVTIDKRRLVPQAKGRLLSAFLESFFERYVEYDFTASL
EEKLDEISDGKLAWKDVLRDFWKDFSGAVADIKELRVTDVLDALNEELAPLVFPAREDGS
NPRICPKCGTGNLSLKLGKFGAFVGCSNYPECSFTRQLGDAANPNGENGGGEDGTKVLGK
DPYTAEEITLRSGRFGPYIQRGDGKEAKRSSLPKGWTPESIDHEKALALLSLPRDVGKHP
ESGKMISAGLGRYGPFVLHDGTYANVDSIEDVFSIGLNRAVTVIAEKQSKAKGGRNGGTA
AALKELGDHPDGGGKIVVRDGKYGPYVNFGKVNATLPKGKDPQSVTIEDALALIAEREAK
GGGGKKPFRKAASPATKKAATKKPAAKKKG
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgtcgtcgtcgaatcgccggccaaggcaaagacaatcaacaaatacctcggc
aagaactacaaggttctggcctcgttcggccatgtccgcgatctgccggccaaggacggc
tcggtgcgtccggacgaggatttcgccatgtcctgggcggtcgacaccgcttcgggcaag
cgcctcgccgacatcgccaaggcagtcaaggatgccgatggcctgatcctcgccaccgac
ccggatcgcgagggcgaagccatctcctggcacgtgctggaagtgctgaagcagaagcgt
gcgctgaaggacaagccggtcagccgtgtcgtcttcaacgccatcaccaagtcgtcggtg
ctggaagcgatggccaatccgcgccagatcgatgcgccgctggtcgatgcctatctggcc
cgccgggcgctcgattatctcgtcggcttcacgctgtcgccggttctgtggcgcaaattg
ccgggcgcccgctcggcgggccgcgtccagtcggtggcgttgcgccttgtctgcgaccgc
gaatccgagatcgagcgcttcatccgcgaggaatattggcagatcgccgccatcctcggc
acgccccgtaacgaggctttcgaagcccggctcaccgcgttcgagcgcaagaagctgcag
aagctcgatatttccaacaaggcgcaggccgacgacgtcaaggcgatgctcgagggggcc
gccttcaaggcgctgtccgtcgaagccaagccgaccaagcgcaatccgggcccgcccttc
accacctcgacgctgcaacaggcggcttcttcgggcctcggcttctccgctacccgcacc
atgcaggtggcgcagcggctctatgaaggcatggagatcggcggcgaaaccaccggcctg
atcacctatatgcgaaccgacggcgtgcagatggcgccggaagcgatcgacgctgcccgc
gatgcgatcgccaaggaattcggtccgaaatacctgccggaaaagccgcgcgtttacaca
acaaaggccaagaacgcccaggaagcgcacgaggcgatccgtccgacggatttcatgcgc
accccggcatcggtcaggcagtacctcgattccgaccagatgcggctctatgagctgatc
tggaagcgcgccatctccagccagatgcagccggccgagatcgagcggaccaccgtcgag
atcgaggcggtaaacggctcgcgcaccgccgagcttcgcgccgtcggttccgtcgtccgc
ttcgacggcttcatcgccgcctacaccgaccagaaggaagacgacgcggaggacgaggaa
aaccgccgcctgcccgagatccgtgtcggcgagcagctcgcccgccaggcgatcaacgcc
acccagcacacgaccgagccgccgcctcgctactccgaggcgacgctgatcaaaaagctg
gaagagctcggcatcggccgcccgtcgacctacaccgcgatcctgaagacgctcgaagac
cgtgactatgtcacgatcgacaagcgccggctggtgccgcaggccaagggtcgcctgctg
tccgccttcctggaaagcttcttcgagcgctatgtcgaatacgacttcaccgcctcgctc
gaggaaaagctcgacgagatttccgacggcaagctcgcctggaaggacgtgctgcgcgac
ttctggaaggatttttccggcgccgtcgctgatatcaaggaactgcgcgtcaccgacgtg
ctcgatgcgctgaacgaggaactggcgccgctggtgtttcccgcgcgggaagacggctcg
aacccgcgcatctgcccgaaatgcggcaccggcaatctgtcgctcaagctcggcaagttc
ggcgctttcgtcggctgttcgaactatccggaatgctccttcacccgccagctcggcgac
gccgccaacccgaatggcgagaatggcggcggcgaggacggcaccaaggtgctcggcaag
gatccttacacggccgaggaaatcacgctgcgctcaggccgcttcggcccctacatccag
cgcggcgacggcaaggaagccaagcgctccagcctgcccaagggttggacacccgaatcc
atcgaccatgaaaaggcgctggcactgctgtcattgccgcgcgatgtgggaaaacatccc
gaatctggcaagatgatctcggccgggctcggccgttatggtccgttcgtgctgcatgac
ggcacctacgccaatgtcgacagcatcgaggacgtgttctcgatcggcctcaaccgcgcc
gtcaccgtgattgccgagaagcaatcgaaggccaagggcggccgcaacggcggcaccgcc
gctgccttgaaagagctcggcgaccatccggacggcggtggcaagatcgtcgttcgcgac
ggcaaatacgggccttacgtcaatttcggcaaggtcaacgccacgctgcccaagggcaag
gatccgcaatcggtgacgatcgaggatgcgctggcgctgatcgccgagagagaagccaag
ggcggcggcggcaagaagccgttccgcaaggcagcgtccccggcaaccaagaaagcggcg
accaagaagccggccgcgaagaaaaaaggatag
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