Mesorhizobium opportunistum: Mesop_4176
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Entry
Mesop_4176 CDS
T01542
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
mop
Mesorhizobium opportunistum
Pathway
mop03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mesop_4176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mop03400
]
Mesop_4176
DNA repair and recombination proteins [BR:
mop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mesop_4176
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mesop_4176
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_25
DnaJ_CXXCXGXG
BCA_ABC_TP_C
nSTAND1
AAA_21
AAA_33
Gluconate_2-dh3
CA109-like
Motif
Other DBs
NCBI-ProteinID:
AEH88609
LinkDB
All DBs
Position
complement(4302303..4305224)
Genome browser
AA seq
973 aa
AA seq
DB search
MADHKFLSIRGAREHNLKNVDLDLPRDSLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARVGV
PYSPATGLPIESQTVSQMVDRVLALEEGTRLFLLAPIVRGRKGEYRKELLELQKKGFQRV
KVDGVFYEIADVPALDKKYKHDIDVVVDRIVVRGDLATRLADSIETALKLAEGLAVAEFA
DKPLDASQTGEDSVNKSKNETHERILFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPTC
DGLGSQRAIDPNLVVPDENISLRDGAVSPWAKSTSPYYSQTLEALGKAYNFKLGDKFKDL
TTEAQDAILRGTGEREITFQYDDGLRSYKTTKTFEGVIPNLERRWKETESAWMREEIERF
MSATPCPVCKGYRLKPEALAVKIGGKHIGEVTEQSIRNADKWFTDLPAQLNDKQNEIAVR
VLKEIRERLRFLNDVGLDYLTLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNTRLLDTLKHLRDIGNTVIVVEHDEDAILHADYVVDMGPAAGIHGGEIIAQGTPQ
QVMANPNSITGQYLSGALEVATPGVRREAKKNRRLKIVGARGNNLKNVTAEIPLGTFTAV
TGVSGGGKSTFLIETLFKAASRRIMGSREHPAEHDRIEGLEFLDKVIDIDQSPIGRTPRS
NPATYTGAFTPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCHGKRYNRETLDVLFKGKSIADVLDMTVEEGVDFFAAVPGVRDKLDTLKQVGLG
YIHIGQQATTLSGGEAQRIKLAKELSRKATGKTLYILDEPTTGLHFHDVAKLLEVLHELV
DQGNTVVVIEHNLEVIKTADWVLDLGPEGGDGGGELVASGTPEAIVREKRSYTGQFLKEL
LERRPGGKREAAE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccataaattcctttccattcgcggggcgcgcgaacacaatctgaagaacgtc
gatctcgacctgccgcgtgacagcctgatcgtcatgaccggcctgtcggggtccggcaag
tcgtcgcttgccttcgacaccatctatgccgaaggccagcgccgctatgtcgaaagcctg
tcggcctatgcgcgccaattcctcgagatgatgcagaagcctgacgtcgaccagatcgac
ggcctgtcgccggccatctccatcgagcaaaagaccacatcgaagaacccacgctcgacg
gtcggcaccgtcaccgagatctacgactacatgcgtctgctgttcgcgcgtgtcggcgtt
ccctattcgccggccaccggcctgccgatcgagagccagacggtcagccagatggtcgac
cgcgtgctggcgctcgaggaaggcacacgactgttcctgctggcgcccatcgtgcgcggc
cgcaagggcgagtaccgcaaggagctcctcgaactgcagaagaagggcttccagcgcgtc
aaggtcgacggcgtcttctatgaaatcgccgacgttccggcgctggacaagaaatacaag
catgacatcgatgtcgtcgtcgaccgcatcgtcgtgcgcggcgatctcgccacgcggctt
gccgactccatcgagacggcgctgaagctcgccgaggggcttgcggtggccgagttcgcc
gacaagccgctcgacgccagccagaccggcgaggattcggtcaacaagtcgaagaacgag
acgcatgagcgcatcctgttctcggaaaaattcgcctgtccggtgtccggcttcaccatt
cccgagatcgagccgcgcctgttctcgttcaacaacccgttcggcgcctgcccgacctgc
gacggtctcggcagccagcgtgccatcgaccccaacctcgtcgtgcccgacgagaacata
tcgctgcgcgacggcgccgtcagcccgtgggcgaaatcgacctcgccctactactcgcag
acgctcgaagcgcttggcaaggcttacaacttcaagctcggcgacaagttcaaggatctg
accaccgaggcccaggacgcgatcctgcgcggcaccggcgagcgcgagatcaccttccag
tacgatgatggcttgcgctcctacaagacaaccaagaccttcgaaggcgtcatccccaat
ctcgaacggcgctggaaggagaccgaatccgcctggatgcgcgaggagatcgagcgcttc
atgtcggcgacgccttgcccggtctgtaagggctaccggctgaagccggaagctctggcg
gtgaagatcggcggcaaacacatcggcgaggtcaccgagcagtcgatccgcaatgccgac
aaatggttcaccgacctgcccgcccagctcaacgacaagcagaacgagatcgcggtgcgg
gtgctgaaggaaatccgcgagcggctgcgcttcctcaacgatgtcggtctcgactacctg
acattgtcgcgcaattccggcacgctgtcgggcggcgagagccaacgcatccggctggcc
tcgcagatcggctcgggcctgaccggcgtgctctacgtgctggacgagccgtcgatcggc
ctgcatcagcgcgacaacacgcggctgctcgacacgctgaagcacctgcgcgacatcggc
aacacggtgatcgtcgtcgagcatgacgaggacgccatcctgcatgccgactatgtcgtc
gacatgggaccggccgccggcatccatggcggcgagatcatcgcccagggcacgccccag
caggtgatggccaaccccaattcgatcaccggccaatatctgtcgggcgcgctggaagtc
gccacccctggtgttcggcgtgaggcgaaaaagaatcgccgcctgaaaatcgtcggcgcg
cgcggcaacaatctgaagaacgtcaccgccgaaatcccgctcggcaccttcaccgccgtc
accggcgtgtcgggtggcggcaagtcgactttccttatcgagacgctgttcaaggcggcc
tcgcgccgcatcatgggctcgcgcgagcatccggccgagcatgaccgcatcgagggcctc
gaattcctcgacaaggtcatcgacatcgaccagtcgccgatcggccgcacgccgcgttcg
aaccccgcgacctataccggcgccttcacgccgatccgcgactggttcgccggcctgccg
gaagccaaggcacgcggctaccagcccggccgcttctccttcaacgtcaagggtggccgg
tgcgaggcctgccagggcgacggcgtcatcaagatcgaaatgcacttcctgcccgacgtc
tacgtcacctgcgatgtctgccacggcaagcgctacaaccgcgagacgctcgacgtgctg
ttcaagggcaagtcgatcgccgacgtactcgacatgacggtcgaggaaggcgtcgatttc
ttcgccgccgtgcccggcgtgcgcgacaagctcgacacgctgaagcaggttggcctcggc
tatatccatatcggccagcaggcgacgacactgtccggcggcgaggcgcagcggataaaa
ctcgccaaggaactgtcgcgcaaggcgaccggcaagacgctctacatcctcgatgagccg
accaccggcctgcacttccacgatgtcgccaaactgttggaagtgctgcacgaactggtc
gaccagggcaacacggtggtggtcatcgagcacaatctcgaagtgatcaagaccgccgac
tgggtgctcgacctcggccccgaaggcggcgacggcggcggcgagcttgtcgcgtccggc
acgccggaagcgatcgtgcgcgaaaaacgcagctacaccggtcagttcctcaaggagctt
ctggagcggcgccccggaggcaagcgcgaagcggcggagtga
DBGET
integrated database retrieval system
