Mesorhizobium opportunistum: Mesop_4630
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Entry
Mesop_4630 CDS
T01542
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mop
Mesorhizobium opportunistum
Pathway
mop03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mop00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mesop_4630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mop03021
]
Mesop_4630
03400 DNA repair and recombination proteins [BR:
mop03400
]
Mesop_4630
Enzymes [BR:
mop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mesop_4630
Transcription machinery [BR:
mop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mesop_4630
DNA repair and recombination proteins [BR:
mop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mesop_4630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RnfC_N
Phage_cement_4
Motif
Other DBs
NCBI-ProteinID:
AEH89051
UniProt:
F7YDV0
LinkDB
All DBs
Position
complement(4752413..4756609)
Genome browser
AA seq
1398 aa
AA seq
DB search
MNQEVMNLFNPQAPAQVFDSIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTALKEHQLLSEEEYMIAVDEYGEDSFTA
MIGAEAIHDLLAGMDLEKIAGDLRSELASTTSELKQKKYLKRLKVVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLSIVNQNEPGEGMVFADMGELQHALE
TKAVTLHAKIKGRFRTVDAEGKVVSKIHDTTPGRMIIGELLPKNVNVPYETANQEMTKKN
ISKMIDTVYRHCGQKETVIFCDRIMALGFAHACRAGISFGKDDMLIPDSKIKLVSDTEAL
AKEYEQQYNDGLITQGEKYNKVVDAWAKCSEKVADEMMARIKAVEFEDNGRQKPMNSIYM
MSHSGARGSPTQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIVNSVDCGTDKGLTMQPIVDAGQVVASVGQRVLGRTS
LDDINHPVTGDLLVKAGTLMDERDVEQIEKAGVQSVRIRSALTCEVRVGVCAVCYGRDLA
RGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHMGGTAQVVDSSFLEASYEGKVEIRNRNV
VRNSDGQQMVMGRNMAVLILDEAGKERATHRVTYGSRIFVDDGDKVKRGQRIAEWDPYTR
PVLTEIEGKVSYEDLVDGISVQETADESTGITKREVIDWRSTPRGNDLKPAIAILDAKGK
VGKLSKGGDARFLLSVEAILSVEPGAQVRPGDVLARIPMESAKTKDITGGLPRVAELFEA
RRPKDHAIIAEIDGTIRFGRDYKNKRRIIIEPHDSTLEPVEYLIPKGKPFHLQDGDVIEK
GDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVSINDKHIEVIVRQMLQKVEI
TTQGDSTYIPGDHVDVIELEEVNERLIEDGKKPAEGQPVLLGITKASLQTPSFISAASFQ
ETTRVLTEAAVAGKTDMLQGLKENVIVGRLIPAGTGGTMSQIRRIATSRDELIIDERRKA
SGVEVAEPMLADMTTAAQ
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatctcttcaatccgcaggcgcctgcgcaggtgttcgattcc
atccggatctcgcttgccagccctgagaagattctgtcctggtcgttcggcgagatcaag
aagccggagaccatcaactaccgcaccttcaagccggagcgtgacggtctgttctgcgcg
cgcatttttggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaag
tacaagggcgtcatctgcgaaaagtgcggcgtcgaagtcacgctgtcgcgcgttcgccgc
gagcgcatgggccatatcgagctcgccgctcccgtcgcccatatctggttcctgaagtcg
ctgccctcgcgcatcggcacgctgctcgacatgaccctgaaggacatcgagcgggtcctg
tacttcgagaactacatcgtcaccgagcctggcctcaccgcgctgaaggagcaccagctg
ctcagcgaggaagagtacatgatcgccgtcgacgagtatggcgaggatagttttaccgcc
atgatcggcgccgaggccatccacgacctcctggccggcatggacctggagaagatcgcc
ggcgacctgcgttcggaactggcttcgaccacgtccgagctgaagcagaagaagtatctg
aagcggcttaaggtcgtcgagaacttcatggaatccggcaaccgtccggaatggatgatc
atgaaggtggttccggtgatcccgccggacctgcgtccgctcgtcccgctggacggtggc
cgtttcgccacgtccgacctgaacgacctctatcgccgcgtcatcaaccgcaacaaccgt
ctgaagcggctgatcgagctgcgggcaccgggcatcatcgtgcgcaatgaaaagcgcatg
ctgcaggaagccgtcgatgcgctgttcgacaatggccgtcgcggccgcgtcatcacaggc
gccaacaagcgtccgctgaagtcgctgtccgacatgctcaagggcaagcagggccggttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgttcggtcatcgtgaccggt
ccggagctcaagctgcaccagtgcggcctgccgaagaagatggcgctcgaactgttcaag
cccttcatctacgcccgtctcgacgccaagggttactcctcgaccgtcaagcaggcgaag
aagctggtcgagaaggagcgtccggaggtctgggatatcctcgacgaggtcatccgcgag
catcccgtgctgctgaaccgcgcgccgacgctgcaccgcctcggcatccaggcgttcgag
ccgatcctgatcgaaggcaaggcgatccagctgcatccgctggtctgcacggccttcaac
gccgacttcgacggcgaccagatggcggtccacgtgccgctgtccctggaagcgcagctt
gaagcccgcgtgctgatgatgtcgaccaacaacatcctgcacccggcttccggcgcgccg
atcatcgtgccgtcgcaggacatggttctgggtctctactatctctcgatcgtcaaccag
aacgagccgggcgagggcatggtgtttgccgacatgggcgaactccagcacgcgctcgag
accaaggcggtgacgctgcacgccaagatcaagggccgcttccgcacggtcgacgccgaa
ggcaaggtcgtgtcgaagatccacgacactacgcctggccgcatgatcatcggcgagctt
ctgccgaagaacgtcaatgtgccgtacgagaccgcaaaccaggagatgaccaagaagaac
atctccaagatgatcgacaccgtctaccgccattgcggtcagaaggagacggtcattttc
tgcgatcgcatcatggcgctcggtttcgcccacgcctgccgtgccggcatttcgttcggc
aaggacgacatgctgatcccggactccaagatcaagctggtgtcggacaccgaggctttg
gccaaggaatacgagcagcagtacaatgacggcctgatcacccagggcgagaagtacaac
aaggtcgtcgacgcgtgggccaagtgctcggaaaaggtcgccgacgaaatgatggcccgc
atcaaggccgtggagttcgaggacaatggccgtcagaagccgatgaactcgatctacatg
atgtcgcactccggtgcgcgtggctcgcccacgcagatgcgccagctcgccggcatgcgc
ggcctgatggccaagccgtcgggtgaaatcatcgagacgccgatcatctcgaacttcaag
gaaggcctgaccgtgctcgagtacttcaactcgacccatggcgcccgcaagggtctggcc
gacaccgccttgaagacggcgaactcgggttacctcacccgtcgtctcgtcgacgtggca
caggactgcatcgtcaactccgtggattgcggcaccgacaagggcctcaccatgcagccg
atcgtcgatgccggtcaggttgtcgcttcggtcggccagcgcgtgctgggccgcacctcg
ctcgacgatatcaaccatccggtgaccggcgacctgctggtcaaggccggaacgctgatg
gacgagcgtgacgtggagcagatcgaaaaggccggcgtccagtcggtccgcatccgctcg
gcactgacctgcgaggtcagggttggcgtgtgcgcggtctgctacggacgcgatctggcc
cgcggcaccccggtcaaccagggtgaagccgtcggcgtcatcgcggcgcagtcgatcggt
gagccgggcacccagctcaccatgcgcaccttccacatgggcggtaccgcgcaggtggtg
gacagctcgttccttgaagcctcctacgagggcaaggtcgagatccgcaaccgcaacgtg
gtgcgcaactccgacggccagcagatggtcatgggccgcaacatggcggtgctgatcctc
gacgaagccggcaaggagcgcgccacgcaccgcgtcacctatggttcgcgtatcttcgtg
gacgatggcgacaaggtgaagcgcggccagcgtatcgccgagtgggatccctatacccgc
ccggtcctcaccgaaatcgagggcaaggtgtcgtacgaggatctggtcgacggcatttcc
gtccaggaaacggccgacgaatcgaccggcatcaccaagcgtgaggtcatcgactggcgt
tcgacgccacgcggcaacgacctcaagccggcgattgcgatcctggacgccaagggcaag
gtcggcaagctgtcgaagggtggcgacgcccgcttcctgctctcggtcgaggccattctc
tcggtcgagccgggtgcgcaggttcgccccggcgacgtcctggcgcgtatcccgatggaa
agcgccaagaccaaggacatcaccggcggtctgccgcgtgttgccgaactgttcgaggcc
cgccgtccgaaggatcacgccatcatcgccgagatcgatggcacgatccgcttcggccgc
gactacaagaacaagcgccgcatcatcatcgagccgcatgactcgacgctcgagccggtc
gaatacctgatcccgaagggcaagccgttccatctccaggacggcgacgtcatcgagaag
ggcgactatatcctcgacggcaatccggcgccgcacgacatcctggcgatcaagggcgtg
gaggcacttgcttcctacctcgtcaacgaaatccaggaggtctaccgcctgcagggcgtg
tcgatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtcgagatc
accacgcagggcgactcgacctacattccgggcgaccacgtcgacgtgatcgagctggaa
gaggtcaacgagcgcctgatcgaggacggcaagaagccggccgaaggtcagccggtgctg
ctcggcatcaccaaggcctcgctgcagacgccgtccttcatctcggccgcctccttccag
gagacgaccagggtgctgacggaagccgcggttgccggcaagaccgacatgctgcagggc
ttgaaggaaaacgtcatcgtcggccggctgatcccggccggtaccggcggcacgatgagc
cagatccggcgcatcgccacctcgcgcgacgaactcatcatcgacgagcgccgcaaggcc
tccggtgtggaagtcgccgagccgatgctggccgacatgacaaccgccgcgcagtaa
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