Mesorhizobium opportunistum: Mesop_4968
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Entry
Mesop_4968 CDS
T01542
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mop
Mesorhizobium opportunistum
Brite
KEGG Orthology (KO) [BR:
mop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mop03016
]
Mesop_4968
Enzymes [BR:
mop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Mesop_4968
Transfer RNA biogenesis [BR:
mop03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mesop_4968
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AEH89388
UniProt:
F7Y1A3
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All DBs
Position
5078026..5079177
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AA seq
383 aa
AA seq
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MHVITTQKELETALAAFEKSDFVTVDTEFIRETTFWPILCLIQMAAPGVTALIDPLSSDI
DLRPFFKLMANEAVVKVFHAARQDIEIIVHLGDLVPHPVFDTQVAAMVCGFGDSVSYDQL
VQRITGARLDKSSRFTDWRHRPLSDKQLDYALADVTHLIEVYQHLNAELARENRAHWLNE
EMDVLTSRETYDPHPEDAWKRLKMRLRKPQELAIVQAVAAWREREARERDVPRGRVLKDD
AIYEVAQQAPRDAAALAKLRTTPKGWERSSTATALLGAVNTALALPKEQMPKLPKSFQPP
EGSSAAAELLKVLLRIIAEKQGVASKVLASSDDIDRIAAEGEEADVPALQGWRRAVFGEA
ALKLVRGEIGIKFDKRKIAVFDL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcatcaccacccagaaagaactcgagaccgctctcgccgctttcgaaaagtcg
gatttcgtcaccgtcgacaccgaattcatccgcgagacgaccttctggccaatcctgtgc
ctgatccagatggccgcgccgggcgtgacggcgctgatcgatcccttgtcatcggacatc
gacctgaggccgttcttcaagctgatggccaacgaggcggtggtcaaagtcttccacgcc
gccaggcaggacatcgaaatcatcgtccatctcggcgacctggttccgcatcccgtcttc
gatacacaggtcgcggcgatggtctgcggcttcggcgacagcgtttcctatgatcagctg
gtgcagcgcatcaccggcgcgcggctcgacaagtcgtcgcgcttcaccgactggcgccac
cggccgctttccgacaagcagctcgattatgcgctggccgacgtcacccatctgatcgag
gtctatcagcacctcaacgccgaactggcgcgggaaaaccgcgcccactggctgaacgag
gaaatggacgtgctgacctcgcgcgagacctacgatccgcatcccgaggacgcctggaag
cggctgaagatgcggctgcgcaagccgcaggaactggcgatcgtgcaggccgtggcggca
tggcgcgagcgcgaggccagggaacgcgacgtgccgcgtggccgggtgctcaaggacgac
gcgatctacgaggtggcgcagcaggcgccgcgcgatgcggcggcccttgccaagctgcgc
acgacgccgaagggctgggagcggtcatcgacggcgacggcgctgctcggcgccgtcaac
acggcgctagccttgcccaaggagcagatgccgaagctgccgaagagtttccaaccgccc
gagggatcgagcgctgccgcggaactgttgaaagtgctgctcaggatcatcgccgaaaag
cagggcgtggcttcgaaagtgctggcctccagcgacgatatcgaccgtatcgcggccgaa
ggcgaggaggccgacgtgccggccctgcaaggttggcggcgcgccgtgttcggcgaagcg
gcgctgaagctggttcgcggcgagatcggcatcaagttcgacaagcgcaagatcgcggtc
ttcgatttgtag
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