Mesorhizobium opportunistum: Mesop_5183
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Entry
Mesop_5183 CDS
T01542
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mop
Mesorhizobium opportunistum
Pathway
mop03420
Nucleotide excision repair
mop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mesop_5183
03430 Mismatch repair
Mesop_5183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mop03400
]
Mesop_5183
Enzymes [BR:
mop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mesop_5183
DNA repair and recombination proteins [BR:
mop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mesop_5183
MMR (mismatch excision repair)
Other MMR factors
Mesop_5183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEH89599
UniProt:
F7Y4X1
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All DBs
Position
complement(5292065..5294158)
Genome browser
AA seq
697 aa
AA seq
DB search
MNLAAHDSTFVESTVPPAYLERLNDAQRQAVEHGDGKIAGPLLVIAGAGSGKTNTLAHRV
AHLIVKGADPRRILLMTFSRRAASEMARRVERIAGEVLGRDAAVITDALTWAGTFHGIGA
RLLRDYALEIGLDPAFTIHDREDSADLMNLVRHELGLSKTEARFPTKGTCLAIYSRAVNA
QAPLGEVLGSAFPWCAGWAEQLKQLFAGYVEAKQAQNVLDYDDLLLYWAQMAAEPEIAAH
LGGRFDHVLVDEYQDTNRLQASILMALKPDGAGLTVVGDDAQSIYSFRAAEVRNILDFPK
QFAQAADVVMLERNYRSTETILAAANAVIGEASERFTKNLWSERKSTGKPRLVNVRDEVE
QANFVCDTILAEREAGTALKSQAVLFRASHHSGPLEIELTRRNIPFVKFGGLKFLDAAHV
KDVLAVLRFAENPRDRVAGFRVLQLLPGIGPSAAAQVVETMTSALDEAMGLAGWRPPQRA
ADDWPSFVALYSGLRAGAKWPADLEQVRLWYEPHLERIHEDAITRRADLLQLEQIGSGYA
SRERFLTELTLDPPDATSDQAGPPHRDEDYLILSTIHSAKGQEWKNVFVLNTVDGCIPAD
LGVGTKEDIEEERRLLYVAMTRAKDNLNLVMPQRFFPHGQAARGDRHLYASRTRFIPASI
LAAFEQVSWPSAQAAQGRAPRPDVRVDIGARMRGMWK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgccgcccatgattcgacctttgtggaatcgaccgtcccgcccgcctacctt
gagcggttgaacgacgcccagcgccaggccgtcgagcatggcgacggcaagatcgcgggg
cctttgctggtcattgccggcgccggctcgggcaagaccaacacgttggcgcatcgcgtc
gcgcacctgatcgtcaagggcgccgacccgcgccgcatcctgctgatgaccttttcgcgg
cgcgccgcgtccgagatggcgagacgcgtcgagcgcatcgccggcgaggtgctcggccgc
gacgcggcggtgatcacggatgcgttgacctgggccggcacctttcatggcatcggcgcc
cggctgctgcgcgattatgcgctggagatcggcctggatccggccttcaccatccatgac
cgcgaggattccgccgacctgatgaacctggtccggcatgaactcggcctctcgaagacg
gaggcgcgctttccgaccaagggcacctgcctcgccatctattcgcgcgccgtcaacgcg
caggcgccgttgggcgaagtattgggttccgcctttccctggtgcgccggctgggccgag
cagctgaagcagctgttcgccggttacgtcgaggccaagcaagcgcagaacgtgctcgat
tacgacgatctgctgctctattgggcgcagatggcggccgagcctgaaatcgccgcgcat
ctgggcgggcgtttcgaccatgtgctcgtcgatgaataccaggacacaaaccggctgcag
gcttcgatcctgatggcgctgaagcccgacggtgccgggctgacggtggtcggcgacgat
gcgcagtcgatctattcgttccgcgccgccgaggtgcgcaacattctcgatttccccaag
cagttcgcgcaagccgccgatgtggtgatgctggagcgcaactaccgctcgaccgagacc
atcctcgccgccgccaacgcggtgatcggcgaggcctcggaacgcttcaccaagaacctg
tggtcggagcgcaaatccacgggcaagccgagactggtgaacgtccgcgacgaggtcgag
caggcgaatttcgtctgcgataccatcctggccgagcgcgaggccggcaccgcgctgaaa
tcccaggcggtgctgtttcgtgcctcgcaccacagcgggccgctcgagatcgagctgacg
cggcgcaacattcccttcgtaaagttcggcggtttgaagttcctcgatgccgcccacgtc
aaggatgtgctggcggtgctgcgcttcgccgaaaacccgcgcgaccgcgttgccggcttt
cgggtgctgcagcttttgccgggaattggcccttcggccgccgcgcaggtcgtcgagacg
atgacatctgcgctggacgaggcgatgggcctggccggatggcgcccgccgcagcgcgcg
gcggacgactggccaagcttcgtcgcgctctattcgggcctgcgggccggcgccaaatgg
cctgccgatctcgaacaggtcaggctgtggtacgagccgcatctggagcgcatccatgag
gatgcgatcacgcgccgcgccgaccttttgcaactcgagcagatcggatcgggttatgcc
tcgcgcgaacggttcctgaccgagctgacgctcgacccgccggacgcgaccagtgaccag
gccgggccgccgcatcgggacgaggattatctgatcctgtcgaccatccactcggccaag
ggccaggagtggaaaaatgtctttgtgctcaacaccgtcgatggctgcatcccggccgat
ctcggcgtcggcaccaaggaggacatcgaggaggagcgccggctgctctacgtcgcgatg
acacgggccaaggacaacctcaacctggtcatgccgcagcgcttctttcctcacggccag
gcggcgcgcggggaccgccatctctatgcctcgcgcacccgcttcatcccggcctcgatc
ctcgccgcgttcgagcaggtgtcgtggccaagcgcgcaggccgcgcagggcagggcgccc
cggccggacgtgcgcgtcgacatcggcgcgcgcatgcgcggcatgtggaaatag
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