Mesorhizobium opportunistum: Mesop_6397
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Entry
Mesop_6397 CDS
T01542
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
mop
Mesorhizobium opportunistum
Pathway
mop02020
Two-component system
mop02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mop00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Mesop_6397
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Mesop_6397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mop03021
]
Mesop_6397
Transcription machinery [BR:
mop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mesop_6397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
AEH90736
UniProt:
F7Y543
LinkDB
All DBs
Position
6578600..6579946
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AA seq
448 aa
AA seq
DB search
MKSSLSLLQKQSLGLSPQLIQSIRLLQMNIPELNQFVAQELERNPLLEYAKRRDLPRQGK
SSTAPGDHRAFEEFVALPETLHDHVASQISFTAFTPHERLIANVLAGHLDDTGWLGASAS
ELAGKLNIPPAEVERVLGILQHLDPPGIFARSLGECLEIQLRQRDRFDPAMAALTANLDV
LARRDFRTLKVRCGVDDEDLFDMLQEIRALDPKPGNAFHSGAPECIVPDVWATPSPGGGW
QIEPDPNTQPKVLIKHTYLKEVSRRVGKKSKEMTFLNECLQNALWLISSLDQRAKTIVKV
SNEIVRQQHAFLEYGVAHLRPLNLKAVADVINMHESTVSRVTSNKYMHTPRGVFELKYFF
TVAIASSEGGDAHSAEAVRHRIKAMVAEESFENVLSDDEIADRLKEDGIDLARRTVAKYR
EAMNVPSSIQRRREKRLWHNGNQGLRAS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgtcgttgagcctacttcagaaacagtctcttggattatcgcctcaactcatc
cagtcgattcgcctgcttcaaatgaacattcccgaactgaatcagttcgtggcccaggag
ctcgagagaaatccccttctggagtatgcgaagagacgggatctgcccaggcaagggaaa
tcgagcaccgcgcctggcgatcatcgtgccttcgaggagtttgtcgccttaccagaaacg
ttgcacgaccatgtcgcttctcagatttccttcaccgccttcacgccgcacgagcggctg
attgctaatgtgcttgcgggacatctggatgacactggttggcttggggcaagtgcttcg
gagctggccgggaagctaaacatcccgccggccgaagtggaacgagttttgggtatcttg
cagcacctcgatccgccggggattttcgcacgatctctcggcgaatgtcttgagatacag
ctgcgccagcgagaccggttcgacccggccatggcggctttgactgccaaccttgacgtg
cttgcgcgacgcgattttcggactttgaaggtgcgttgcggcgtcgacgacgaagatctt
ttcgacatgctgcaggaaatccgtgcgctcgaccccaagcccggaaacgcattccactcg
ggcgcgccggaatgcatcgtgccggatgtctgggccactccctcgcccggaggtggatgg
cagatcgagcctgatccgaacacgcagcccaaggttttgatcaaacacacttatctcaag
gaagtttcacgccgagtcggcaaaaaatcgaaagagatgacatttctcaacgaatgctta
cagaatgcgctctggttaatcagcagcctcgatcagcgcgccaagacgatcgtcaaagtt
tcgaacgaaatcgtgcgccagcagcatgcctttctggaatatggcgtcgcccacctacgg
cccctcaatctcaaggcggtcgctgacgtgatcaacatgcacgagtcgactgtaagccgg
gtaacgtcgaacaagtacatgcacaccccacgtggagtgttcgagctcaagtactttttc
actgtcgcgatcgcttcttccgaaggcggtgacgcgcactccgccgaagctgtccgccat
aggatcaaagcaatggtcgccgaagaatcgtttgagaacgtgctttcggacgatgaaatc
gctgaccggctcaaggaagacggtatcgatctcgctcgccgcacggtcgcaaaatatcgc
gaggcgatgaatgtcccctcctccatacaacggcgccgggaaaaacgcttgtggcacaac
ggtaatcaaggcctcagggcctcgtga
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