Moritella sp. 36: HWV03_10120
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Entry
HWV03_10120 CDS
T08847
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
moq
Moritella sp. 36
Pathway
moq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWV03_10120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moq03019
]
HWV03_10120
Enzymes [BR:
moq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HWV03_10120
Messenger RNA biogenesis [BR:
moq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HWV03_10120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase3
Motif
Other DBs
NCBI-ProteinID:
QUM89127
LinkDB
All DBs
Position
2256629..2257930
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AA seq
433 aa
AA seq
DB search
MGFSALNLNQNLINTVTKLGYETPTPIQAQAIPAILEGRDIMGGAQTGTGKTAAFALPII
HQLMAQQLTANSTESTAKKQIRALVLTPTRELSQQVHKSFVTYSEDSELTAELVYGGVSI
NPQVKALAQGADILVATPGRLLDLLDRETLTLEFVEKIVFDEADRMLDMGFMEEIRRILK
HLPKKRQTMLFSATFDDAIFKLSKSLLNDPLLVEVDTRNAAAEQVEQIVYAVDTDRKREL
TSYLIGSRNWHQVLIFTRTKQGADSLAKEMCKDGIKTIAVHGDKSQGARERGLEDFKNGK
IRALVATDVAARGLDIEQLKHVINFELPFKAEDYIHRIGRTGRAGLSGTATSLVSIGENW
LLEEIETLLDTRLVAQWLPGYEPDLSKPVDDGRGKGGSKGNNNSRTADKRRAKNRSYGKK
TNNRAKKDVKPNN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgggtttttctgctttaaatcttaatcaaaatttaattaatactgttaccaagttaggc
tacgaaacgcctacaccaattcaagctcaggctattccggcaattctggaagggcgtgac
atcatgggtggagctcaaactggtacaggtaaaacggcagcatttgcattgcctataatt
caccagttaatggcccagcagttaaccgctaactcaacagagtcaacggctaaaaaacaa
attcgagctttagtattaacgccaacgcgtgaattatcacagcaagtacacaaaagcttt
gttacatatagtgaagacagtgaattaacggctgaacttgtttacggtggcgtgagtatt
aacccacaagttaaagcgcttgcacaaggtgctgacattttagttgcaacaccaggtcgt
ttattggatctattagatcgtgaaacgctaacacttgagtttgttgaaaagatcgtattc
gatgaagctgaccgtatgctcgatatgggctttatggaagaaattcgtcgtatcctaaaa
cacctaccgaaaaaacgtcaaactatgttgttctcggcaacatttgatgatgcgatcttt
aaactaagcaagagcttattaaacgatccattattagttgaagttgatacgcgtaatgca
gcggctgagcaagttgaacaaattgtttatgcggttgatactgatcgtaaacgtgaatta
acgtcttacctaatcggttctcgaaactggcatcaagtacttatctttacccgtactaag
cagggcgcagatagcctagcaaaagaaatgtgtaaagatggtattaagacaatcgctgtg
cacggtgacaaatcacagggcgcacgtgaacgcggtcttgaagatttcaaaaatggtaaa
atacgcgcattagtggcgacagatgttgctgcccgtggtcttgatatcgaacagcttaaa
cacgtaattaactttgaattaccgtttaaagcagaagactatattcaccgtatcggtcgt
accggtcgtgcaggtctatcaggtactgctacgtcgttagtaagtattggtgaaaactgg
ttattagaagaaatcgaaacactgcttgatacccgtttagtagcgcagtggttaccgggt
tatgaacctgatctaagtaaacctgttgatgatggccgtggtaaaggtggtagcaaaggt
aataacaacagtcgtactgctgataaacgtcgtgctaagaatcgttcttatggtaagaaa
acaaataatcgagcgaaaaaagacgttaagccaaataattaa
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