Moritella sp. 36: HWV03_19990
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Entry
HWV03_19990 CDS
T08847
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
moq
Moritella sp. 36
Brite
KEGG Orthology (KO) [BR:
moq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
moq03009
]
HWV03_19990 (rlmD)
Enzymes [BR:
moq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HWV03_19990 (rlmD)
Ribosome biogenesis [BR:
moq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HWV03_19990 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
Cons_hypoth95
Methyltransf_11
Methyltransf_15
MTS
RrnaAD
TRM5-TYW2_MTfase
Methyltr_RsmB-F
Methyltransf_23
DOT1
UPF0020
Motif
Other DBs
NCBI-ProteinID:
QUM90909
LinkDB
All DBs
Position
complement(4505510..4506844)
Genome browser
AA seq
444 aa
AA seq
DB search
MAQIFKAKKVHKTPSKAVEITIEKLDHQGLGLGRLDGKAVFVAGGLPGERVSVNIIEQKK
QYAKAILRKVITPSEQRIEPACPHYATCGGCSLQTLDSHVQADYKQTALFSLLQNFSKND
DIEFAEPILSQPWQYRRTARLSVMFDRKAKTLVFGFRERNSKSLVAINQCPVLVPALSAL
IQPLRQLLATLNVRRDLGHIELFAVDSGIICLFRILKPLKDKDQDLLQAFAGEHQLSIYL
QPEPESILKLTPDTPAAWYQLADGEFKLSFTPGNFIQVNPVVNNQMVAQALDWLDLSPED
RVLDLFCGGGNFSLPVARLCHSVVGVEGVDEMVRQAQVNAMANNVDNAEFYQADLSADFS
KLSWAKNRFDKVLLDPARAGAAETVQYLHKLKVNKIVYVSCNPATLARDSKLLMEKHYKL
TRLGMIDMFPQTGHVESMALFERV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaatttttaaagcaaaaaaagtacataaaactccgagtaaagcggtcgagatc
actattgaaaaattagatcatcaaggtttaggtttgggtcgccttgatggcaaagcggta
tttgttgctggtggattaccaggtgaacgcgtatcagtgaatattattgaacaaaaaaag
caatacgcaaaagcgatcttaagaaaagtaataacgccatctgagcaacgaatcgaacca
gcatgcccgcattatgcaacgtgtggcggctgtagtttacaaacattagatagccatgtt
caggctgattataaacaaactgcattatttagtttattacagaacttcagtaaaaatgat
gatattgaatttgctgagcctatattatcgcagccttggcagtatcgtcgtactgcacgt
ctaagtgtgatgtttgatcgtaaagccaagacattggtatttggcttccgtgaacgtaac
agtaaatccctagtcgcaattaatcagtgtccggtattagtacccgccttgtcagcattg
attcaacctttacgccaattacttgctacgcttaatgtacgtcgtgatttaggccatatt
gagttgtttgcagtggattctggcattatttgcttattccgaattttaaaaccattgaag
gataaagatcaagatttactgcaagcctttgctggtgaacatcagttaagtatttaccta
caacctgagcctgaatcgatacttaaattaacccctgatacgccagccgcttggtatcag
cttgctgatggtgaatttaaattaagttttacgccgggtaattttattcaagtgaaccct
gtggtgaataaccaaatggtggcgcaagcactcgattggctagatttaagccctgaagac
agagtattagatttgttctgtggtggtggtaactttagtttaccagttgcgcgtttatgt
cattctgtcgtaggtgtggaaggtgttgatgaaatggtgcgtcaggcacaagtcaatgca
atggcgaacaatgtcgataatgcggaattctatcaagcggacttatcggctgacttctct
aagctatcttgggcaaaaaataggtttgataaagtattattagatcctgctcgagcgggg
gcggcagaaacagtgcaatatttacataaactaaaagtgaataaaattgtctatgtatct
tgcaatccagcaacattagcgcgagactcgaagttgttgatggaaaagcattataaatta
acacgccttggtatgattgatatgtttccacaaacgggacatgttgagtcaatggcgtta
tttgaacgcgtttag
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